Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.33■■□□□ 1.49
CPT1AP50416 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.33■■□□□ 1.49
CPT1AP50416 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPT1AP50416 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CPT1AP50416 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPT1AP50416 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.32■■□□□ 1.48
CPT1AP50416 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
CPT1AP50416 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPT1AP50416 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPT1AP50416 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.31■■□□□ 1.48
CPT1AP50416 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CPT1AP50416 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPT1AP50416 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
CPT1AP50416 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.31■■□□□ 1.48
CPT1AP50416 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.31■■□□□ 1.48
CPT1AP50416 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.31■■□□□ 1.48
CPT1AP50416 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
CPT1AP50416 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
CPT1AP50416 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.3■■□□□ 1.48
CPT1AP50416 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CPT1AP50416 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.3■■□□□ 1.48
CPT1AP50416 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
CPT1AP50416 AL109923.1-201ENST00000618799 583 ntBASIC24.3■■□□□ 1.48
CPT1AP50416 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPT1AP50416 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPT1AP50416 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPT1AP50416 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.29■■□□□ 1.48
CPT1AP50416 NCF1B-203ENST00000435988 1254 ntBASIC24.29■■□□□ 1.48
CPT1AP50416 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.29■■□□□ 1.48
CPT1AP50416 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CPT1AP50416 AC104187.1-201ENST00000607510 612 ntBASIC24.29■■□□□ 1.48
CPT1AP50416 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPT1AP50416 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CPT1AP50416 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPT1AP50416 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.28■■□□□ 1.48
CPT1AP50416 MIR663A-201ENST00000385250 93 ntBASIC24.28■■□□□ 1.48
CPT1AP50416 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.28■■□□□ 1.48
CPT1AP50416 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPT1AP50416 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
CPT1AP50416 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.27■■□□□ 1.48
CPT1AP50416 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.27■■□□□ 1.48
CPT1AP50416 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.27■■□□□ 1.48
CPT1AP50416 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.27■■□□□ 1.48
CPT1AP50416 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.27■■□□□ 1.48
CPT1AP50416 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPT1AP50416 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.27■■□□□ 1.48
CPT1AP50416 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPT1AP50416 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CPT1AP50416 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPT1AP50416 MFSD11-216ENST00000590393 1141 ntBASIC24.26■■□□□ 1.47
CPT1AP50416 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CPT1AP50416 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.26■■□□□ 1.47
CPT1AP50416 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.26■■□□□ 1.47
CPT1AP50416 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPT1AP50416 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPT1AP50416 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPT1AP50416 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CPT1AP50416 AL355802.2-201ENST00000402069 882 ntBASIC24.25■■□□□ 1.47
CPT1AP50416 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CPT1AP50416 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPT1AP50416 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPT1AP50416 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPT1AP50416 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPT1AP50416 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.24■■□□□ 1.47
CPT1AP50416 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.24■■□□□ 1.47
CPT1AP50416 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CPT1AP50416 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.24■■□□□ 1.47
CPT1AP50416 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPT1AP50416 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.23■■□□□ 1.47
CPT1AP50416 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.23■■□□□ 1.47
CPT1AP50416 GPX1P1-201ENST00000388829 606 ntBASIC24.23■■□□□ 1.47
CPT1AP50416 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.23■■□□□ 1.47
CPT1AP50416 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.23■■□□□ 1.47
CPT1AP50416 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
CPT1AP50416 ANOS2P-203ENST00000472227 1816 ntBASIC24.23■■□□□ 1.47
CPT1AP50416 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPT1AP50416 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms