Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YLR163W-AYLR163W-A 114 nt3.74□□□□□ -1.81
SSN8P47821 YLR169WYLR169W 354 nt3.74□□□□□ -1.81
SSN8P47821 HTA2YBL003C 399 nt3.74□□□□□ -1.81
SSN8P47821 URA4YLR420W 1095 nt3.74□□□□□ -1.81
SSN8P47821 ECM23YPL021W 564 nt3.74□□□□□ -1.81
SSN8P47821 TAF14YPL129W 735 nt3.74□□□□□ -1.81
SSN8P47821 PBN1YCL052C 1251 nt3.74□□□□□ -1.81
SSN8P47821 MDM10YAL010C 1482 nt3.73□□□□□ -1.81
SSN8P47821 ZDS1YMR273C 2748 nt3.73□□□□□ -1.81
SSN8P47821 BUD26YDR241W 288 nt3.73□□□□□ -1.81
SSN8P47821 CAP2YIL034C 864 nt3.73□□□□□ -1.81
SSN8P47821 PAM18YLR008C 507 nt3.73□□□□□ -1.81
SSN8P47821 DIA1YMR316W 1011 nt3.73□□□□□ -1.81
SSN8P47821 YGK3YOL128C 1128 nt3.73□□□□□ -1.81
SSN8P47821 YOL162WYOL162W 648 nt3.73□□□□□ -1.81
SSN8P47821 UAF30YOR295W 687 nt3.73□□□□□ -1.81
SSN8P47821 VPS69YPR087W 321 nt3.73□□□□□ -1.81
SSN8P47821 MRP2YPR166C 348 nt3.73□□□□□ -1.81
SSN8P47821 STP22YCL008C 1158 nt3.73□□□□□ -1.81
SSN8P47821 RRP7YCL031C 894 nt3.73□□□□□ -1.81
SSN8P47821 YLR345WYLR345W 1530 nt3.73□□□□□ -1.81
SSN8P47821 RNT1YMR239C 1416 nt3.72□□□□□ -1.81
SSN8P47821 PEP7YDR323C 1548 nt3.72□□□□□ -1.81
SSN8P47821 NBP2YDR162C 711 nt3.72□□□□□ -1.81
SSN8P47821 TAF10YDR167W 621 nt3.72□□□□□ -1.81
SSN8P47821 GIC2YDR309C 1152 nt3.72□□□□□ -1.81
SSN8P47821 COS12YGL263W 1143 nt3.72□□□□□ -1.81
SSN8P47821 SDS3YIL084C 984 nt3.72□□□□□ -1.81
SSN8P47821 GSP1YLR293C 660 nt3.72□□□□□ -1.81
SSN8P47821 IZH4YOL101C 939 nt3.72□□□□□ -1.81
SSN8P47821 YOL118CYOL118C 309 nt3.72□□□□□ -1.81
SSN8P47821 TMC1YOR052C 453 nt3.72□□□□□ -1.81
SSN8P47821 SUT2YPR009W 807 nt3.72□□□□□ -1.81
SSN8P47821 LDH1YBR204C 1128 nt3.72□□□□□ -1.81
SSN8P47821 ATG21YPL100W 1491 nt3.72□□□□□ -1.81
SSN8P47821 SPB4YFL002C 1821 nt3.72□□□□□ -1.81
SSN8P47821 EMC1YCL045C 2283 nt3.71□□□□□ -1.82
SSN8P47821 YCL076WYCL076W 744 nt3.71□□□□□ -1.82
SSN8P47821 PDX1YGR193C 1233 nt3.71□□□□□ -1.82
SSN8P47821 YIL171W-AYIL171W-A 453 nt3.71□□□□□ -1.82
SSN8P47821 YJL220WYJL220W 453 nt3.71□□□□□ -1.82
SSN8P47821 ARC19YKL013C 516 nt3.71□□□□□ -1.82
SSN8P47821 MRPS17YMR188C 714 nt3.71□□□□□ -1.82
SSN8P47821 YNR042WYNR042W 429 nt3.71□□□□□ -1.82
SSN8P47821 RGS2YOR107W 930 nt3.71□□□□□ -1.82
SSN8P47821 BUD5YCR038C 1929 nt3.71□□□□□ -1.82
SSN8P47821 RPB2YOR151C 3675 nt3.71□□□□□ -1.82
SSN8P47821 SMP3YOR149C 1551 nt3.71□□□□□ -1.82
SSN8P47821 YJR030CYJR030C 2238 nt3.71□□□□□ -1.82
SSN8P47821 MLH2YLR035C 2088 nt3.71□□□□□ -1.82
SSN8P47821 SER3YER081W 1410 nt3.7□□□□□ -1.82
SSN8P47821 MNT4YNR059W 1743 nt3.7□□□□□ -1.82
SSN8P47821 VAC17YCL063W 1272 nt3.7□□□□□ -1.82
SSN8P47821 YCL075WYCL075W 441 nt3.7□□□□□ -1.82
SSN8P47821 YDR391CYDR391C 699 nt3.7□□□□□ -1.82
SSN8P47821 YDR464C-AYDR464C-A 189 nt3.7□□□□□ -1.82
SSN8P47821 ISC10YER180C 804 nt3.7□□□□□ -1.82
SSN8P47821 LOH1YJL038C 660 nt3.7□□□□□ -1.82
SSN8P47821 RIF2YLR453C 1188 nt3.7□□□□□ -1.82
SSN8P47821 MCM1YMR043W 861 nt3.7□□□□□ -1.82
SSN8P47821 YBL062WYBL062W 381 nt3.7□□□□□ -1.82
SSN8P47821 YNL319WYNL319W 441 nt3.7□□□□□ -1.82
SSN8P47821 CPR8YNR028W 927 nt3.7□□□□□ -1.82
SSN8P47821 GAT2YMR136W 1683 nt3.7□□□□□ -1.82
SSN8P47821 BRE4YDL231C 3378 nt3.7□□□□□ -1.82
SSN8P47821 FLO10YKR102W 3510 nt3.7□□□□□ -1.82
SSN8P47821 PRP22YER013W 3438 nt3.7□□□□□ -1.82
SSN8P47821 SPS2YDR522C 1509 nt3.7□□□□□ -1.82
SSN8P47821 YIL001WYIL001W 1542 nt3.7□□□□□ -1.82
SSN8P47821 YDR034C-CYDR034C-C 1317 nt3.7□□□□□ -1.82
SSN8P47821 YLR410W-AYLR410W-A 1317 nt3.7□□□□□ -1.82
SSN8P47821 CTR86YCR054C 1692 nt3.69□□□□□ -1.82
SSN8P47821 CTK1YKL139W 1587 nt3.69□□□□□ -1.82
SSN8P47821 THI13YDL244W 1023 nt3.69□□□□□ -1.82
SSN8P47821 PHM6YDR281C 315 nt3.69□□□□□ -1.82
SSN8P47821 BMH1YER177W 804 nt3.69□□□□□ -1.82
SSN8P47821 YIL102C-AYIL102C-A 228 nt3.69□□□□□ -1.82
SSN8P47821 SOP4YJL192C 705 nt3.69□□□□□ -1.82
SSN8P47821 THI11YJR156C 1023 nt3.69□□□□□ -1.82
SSN8P47821 YKL162CYKL162C 1209 nt3.69□□□□□ -1.82
SSN8P47821 YMR010WYMR010W 1218 nt3.69□□□□□ -1.82
SSN8P47821 CCS1YMR038C 750 nt3.69□□□□□ -1.82
SSN8P47821 RRP36YOR287C 903 nt3.69□□□□□ -1.82
SSN8P47821 ICY2YPL250C 411 nt3.69□□□□□ -1.82
SSN8P47821 PEX1YKL197C 3132 nt3.69□□□□□ -1.82
SSN8P47821 NUP159YIL115C 4383 nt3.68□□□□□ -1.82
SSN8P47821 TPA1YER049W 1935 nt3.68□□□□□ -1.82
SSN8P47821 RTG3YBL103C 1461 nt3.68□□□□□ -1.82
SSN8P47821 TRE2YOR256C 2430 nt3.68□□□□□ -1.82
SSN8P47821 YEL053W-AYEL053W-A 348 nt3.68□□□□□ -1.82
SSN8P47821 YUH1YJR099W 711 nt3.68□□□□□ -1.82
SSN8P47821 FOL3YMR113W 1284 nt3.68□□□□□ -1.82
SSN8P47821 MVD1YNR043W 1191 nt3.68□□□□□ -1.82
SSN8P47821 PNO1YOR145C 825 nt3.68□□□□□ -1.82
SSN8P47821 KTR6YPL053C 1341 nt3.68□□□□□ -1.82
SSN8P47821 SHR3YDL212W 633 nt3.67□□□□□ -1.82
SSN8P47821 MIC26YGR235C 702 nt3.67□□□□□ -1.82
SSN8P47821 YIL171WYIL171W 330 nt3.67□□□□□ -1.82
SSN8P47821 IRC25YLR021W 540 nt3.67□□□□□ -1.82
SSN8P47821 NEJ1YLR265C 1029 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms