Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 SPO71YDR104C 3738 nt2.53□□□□□ -2
VPS55P47111 BUD4YJR092W 4344 nt2.53□□□□□ -2
VPS55P47111 TFA1YKL028W 1449 nt2.53□□□□□ -2
VPS55P47111 DEG1YFL001W 1329 nt2.53□□□□□ -2
VPS55P47111 SYF1YDR416W 2580 nt2.53□□□□□ -2
VPS55P47111 CHA4YLR098C 1947 nt2.53□□□□□ -2
VPS55P47111 DAS2YDR020C 699 nt2.53□□□□□ -2
VPS55P47111 YDR193WYDR193W 399 nt2.53□□□□□ -2
VPS55P47111 SNM1YDR478W 597 nt2.53□□□□□ -2
VPS55P47111 CDC26YFR036W 375 nt2.53□□□□□ -2
VPS55P47111 YNL165WYNL165W 1221 nt2.53□□□□□ -2
VPS55P47111 RPA43YOR340C 981 nt2.53□□□□□ -2
VPS55P47111 snR42snR42 351 nt2.53□□□□□ -2
VPS55P47111 SWP82YFL049W 1872 nt2.53□□□□□ -2
VPS55P47111 MSN4YKL062W 1893 nt2.53□□□□□ -2
VPS55P47111 YLR177WYLR177W 1887 nt2.53□□□□□ -2
VPS55P47111 DOA4YDR069C 2781 nt2.53□□□□□ -2
VPS55P47111 FLO5YHR211W 3228 nt2.53□□□□□ -2.01
VPS55P47111 IBA57YJR122W 1494 nt2.52□□□□□ -2.01
VPS55P47111 GAS5YOL030W 1455 nt2.52□□□□□ -2.01
VPS55P47111 ENA2YDR039C 3276 nt2.52□□□□□ -2.01
VPS55P47111 ENA1YDR040C 3276 nt2.52□□□□□ -2.01
VPS55P47111 DET1YDR051C 1005 nt2.52□□□□□ -2.01
VPS55P47111 COS4YFL062W 1140 nt2.52□□□□□ -2.01
VPS55P47111 YAE1YJR067C 426 nt2.52□□□□□ -2.01
VPS55P47111 COS3YML132W 1140 nt2.52□□□□□ -2.01
VPS55P47111 ARG80YMR042W 534 nt2.52□□□□□ -2.01
VPS55P47111 YBL065WYBL065W 345 nt2.52□□□□□ -2.01
VPS55P47111 YAR1YPL239W 603 nt2.52□□□□□ -2.01
VPS55P47111 COS2YBR302C 1140 nt2.52□□□□□ -2.01
VPS55P47111 VPS33YLR396C 2076 nt2.52□□□□□ -2.01
VPS55P47111 SEC6YIL068C 2418 nt2.52□□□□□ -2.01
VPS55P47111 PTM1YKL039W 1572 nt2.52□□□□□ -2.01
VPS55P47111 APM4YOL062C 1476 nt2.52□□□□□ -2.01
VPS55P47111 MNR2YKL064W 2910 nt2.52□□□□□ -2.01
VPS55P47111 PWP2YCR057C 2772 nt2.51□□□□□ -2.01
VPS55P47111 SIZ1YDR409W 2715 nt2.51□□□□□ -2.01
VPS55P47111 STV1YMR054W 2673 nt2.51□□□□□ -2.01
VPS55P47111 DTD1YDL219W 453 nt2.51□□□□□ -2.01
VPS55P47111 ARP10YDR106W 855 nt2.51□□□□□ -2.01
VPS55P47111 SLX8YER116C 825 nt2.51□□□□□ -2.01
VPS55P47111 YFR045WYFR045W 930 nt2.51□□□□□ -2.01
VPS55P47111 YHR180WYHR180W 492 nt2.51□□□□□ -2.01
VPS55P47111 YIL152WYIL152W 708 nt2.51□□□□□ -2.01
VPS55P47111 IBD2YNL164C 1056 nt2.51□□□□□ -2.01
VPS55P47111 VTC4YJL012C 2166 nt2.51□□□□□ -2.01
VPS55P47111 TOM1YDR457W 9807 nt2.51□□□□□ -2.01
VPS55P47111 CSR2YPR030W 3366 nt2.51□□□□□ -2.01
VPS55P47111 SYT1YPR095C 3681 nt2.51□□□□□ -2.01
VPS55P47111 NOP4YPL043W 2058 nt2.51□□□□□ -2.01
VPS55P47111 MAL12YGR292W 1755 nt2.51□□□□□ -2.01
VPS55P47111 MAL32YBR299W 1755 nt2.51□□□□□ -2.01
VPS55P47111 OMS1YDR316W 1416 nt2.51□□□□□ -2.01
VPS55P47111 GYP6YJL044C 1377 nt2.5□□□□□ -2.01
VPS55P47111 ALO1YML086C 1581 nt2.5□□□□□ -2.01
VPS55P47111 GIS4YML006C 2325 nt2.5□□□□□ -2.01
VPS55P47111 TRP4YDR354W 1143 nt2.5□□□□□ -2.01
VPS55P47111 PET54YGR222W 882 nt2.5□□□□□ -2.01
VPS55P47111 BET1YIL004C 429 nt2.5□□□□□ -2.01
VPS55P47111 RPS28BYLR264W 204 nt2.5□□□□□ -2.01
VPS55P47111 INA17YPL099C 549 nt2.5□□□□□ -2.01
VPS55P47111 DYN1YKR054C 12279 nt2.5□□□□□ -2.01
VPS55P47111 NTO1YPR031W 2247 nt2.5□□□□□ -2.01
VPS55P47111 SPO14YKR031C 5052 nt2.5□□□□□ -2.01
VPS55P47111 CIN8YEL061C 3003 nt2.5□□□□□ -2.01
VPS55P47111 HST1YOL068C 1512 nt2.49□□□□□ -2.01
VPS55P47111 TGL3YMR313C 1929 nt2.49□□□□□ -2.01
VPS55P47111 YIR040CYIR040C 333 nt2.49□□□□□ -2.01
VPS55P47111 VPS21YOR089C 633 nt2.49□□□□□ -2.01
VPS55P47111 DIB1YPR082C 432 nt2.49□□□□□ -2.01
VPS55P47111 SLH1YGR271W 5904 nt2.49□□□□□ -2.01
VPS55P47111 YHR202WYHR202W 1809 nt2.49□□□□□ -2.01
VPS55P47111 ENT1YDL161W 1365 nt2.49□□□□□ -2.01
VPS55P47111 TRM1YDR120C 1713 nt2.48□□□□□ -2.01
VPS55P47111 SIP1YDR422C 2448 nt2.48□□□□□ -2.01
VPS55P47111 UBP10YNL186W 2379 nt2.48□□□□□ -2.01
VPS55P47111 MRPS35YGR165W 1038 nt2.48□□□□□ -2.01
VPS55P47111 UNG1YML021C 1080 nt2.48□□□□□ -2.01
VPS55P47111 YMR086C-AYMR086C-A 339 nt2.48□□□□□ -2.01
VPS55P47111 GEM1YAL048C 1989 nt2.48□□□□□ -2.01
VPS55P47111 ETP1YHL010C 1758 nt2.48□□□□□ -2.01
VPS55P47111 YDL176WYDL176W 2127 nt2.48□□□□□ -2.01
VPS55P47111 RRN7YJL025W 1545 nt2.47□□□□□ -2.01
VPS55P47111 RRM3YHR031C 2172 nt2.47□□□□□ -2.01
VPS55P47111 FAS1YKL182W 6156 nt2.47□□□□□ -2.01
VPS55P47111 STE23YLR389C 3084 nt2.47□□□□□ -2.01
VPS55P47111 tF(GAA)DtF(GAA)D 73 nt2.47□□□□□ -2.01
VPS55P47111 tF(GAA)NtF(GAA)N 73 nt2.47□□□□□ -2.01
VPS55P47111 COG1YGL223C 1254 nt2.47□□□□□ -2.01
VPS55P47111 MMM1YLL006W 1281 nt2.47□□□□□ -2.01
VPS55P47111 AHP1YLR109W 531 nt2.47□□□□□ -2.01
VPS55P47111 REH1YLR387C 1299 nt2.47□□□□□ -2.01
VPS55P47111 ERG2YMR202W 669 nt2.47□□□□□ -2.01
VPS55P47111 RPL18AYOL120C 561 nt2.47□□□□□ -2.01
VPS55P47111 NAT3YPR131C 588 nt2.47□□□□□ -2.01
VPS55P47111 CMD1YBR109C 444 nt2.47□□□□□ -2.01
VPS55P47111 NUP85YJR042W 2235 nt2.47□□□□□ -2.01
VPS55P47111 MDM38YOL027C 1722 nt2.47□□□□□ -2.01
VPS55P47111 MET10YFR030W 3108 nt2.47□□□□□ -2.01
VPS55P47111 TDA3YHR009C 1572 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms