Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SSR2P43308 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR2P43308 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
SSR2P43308 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR2P43308 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.74■□□□□ 0.91
SSR2P43308 AC110285.6-201ENST00000617652 491 ntBASIC20.74■□□□□ 0.91
SSR2P43308 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR2P43308 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR2P43308 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SSR2P43308 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.73■□□□□ 0.91
SSR2P43308 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
SSR2P43308 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
SSR2P43308 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
SSR2P43308 PKD1P6-201ENST00000343738 4769 ntBASIC20.73■□□□□ 0.91
SSR2P43308 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.73■□□□□ 0.91
SSR2P43308 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 AC106739.1-201ENST00000617035 715 ntBASIC20.73■□□□□ 0.91
SSR2P43308 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SSR2P43308 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
SSR2P43308 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR2P43308 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR2P43308 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR2P43308 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR2P43308 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SSR2P43308 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SSR2P43308 BX842568.3-201ENST00000418104 571 ntBASIC20.72■□□□□ 0.91
SSR2P43308 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.71■□□□□ 0.91
SSR2P43308 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.71■□□□□ 0.91
SSR2P43308 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
SSR2P43308 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR2P43308 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SSR2P43308 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSR2P43308 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSR2P43308 AC010141.3-201ENST00000456659 717 ntBASIC20.7■□□□□ 0.9
SSR2P43308 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.7■□□□□ 0.9
SSR2P43308 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.7■□□□□ 0.9
SSR2P43308 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
SSR2P43308 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 AC139530.1-201ENST00000575312 1977 ntBASIC20.7■□□□□ 0.9
SSR2P43308 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR2P43308 EP400NL-214ENST00000641289 2402 ntBASIC20.69■□□□□ 0.9
SSR2P43308 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR2P43308 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR2P43308 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR2P43308 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR2P43308 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR2P43308 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.69■□□□□ 0.9
SSR2P43308 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR2P43308 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR2P43308 AC233992.3-201ENST00000607491 485 ntBASIC20.69■□□□□ 0.9
SSR2P43308 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR2P43308 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.69■□□□□ 0.9
SSR2P43308 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSR2P43308 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR2P43308 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR2P43308 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSR2P43308 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSR2P43308 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SSR2P43308 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SSR2P43308 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSR2P43308 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 AP005435.1-201ENST00000529293 1178 ntBASIC20.68■□□□□ 0.9
SSR2P43308 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.68■□□□□ 0.9
SSR2P43308 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 AL139246.5-201ENST00000606645 996 ntBASIC20.68■□□□□ 0.9
SSR2P43308 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSR2P43308 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.68■□□□□ 0.9
SSR2P43308 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SSR2P43308 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 LINC00526-201ENST00000581067 1875 ntBASIC20.68■□□□□ 0.9
SSR2P43308 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms