Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSKP43235 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.65■■□□□ 1.06
CTSKP43235 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.65■■□□□ 1.06
CTSKP43235 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSKP43235 RAP2CP1-201ENST00000605103 478 ntBASIC21.65■■□□□ 1.06
CTSKP43235 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CTSKP43235 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.65■■□□□ 1.06
CTSKP43235 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CTSKP43235 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
CTSKP43235 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSKP43235 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTSKP43235 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
CTSKP43235 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTSKP43235 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CTSKP43235 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.64■■□□□ 1.05
CTSKP43235 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSKP43235 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSKP43235 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSKP43235 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.64■■□□□ 1.05
CTSKP43235 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSKP43235 AC004687.1-201ENST00000579003 1625 ntBASIC21.64■■□□□ 1.05
CTSKP43235 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSKP43235 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.64■■□□□ 1.05
CTSKP43235 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSKP43235 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.64■■□□□ 1.05
CTSKP43235 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSKP43235 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSKP43235 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSKP43235 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSKP43235 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 AC004854.2-201ENST00000608450 1441 ntBASIC21.63■■□□□ 1.05
CTSKP43235 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.63■■□□□ 1.05
CTSKP43235 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTSKP43235 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTSKP43235 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.63■■□□□ 1.05
CTSKP43235 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.63■■□□□ 1.05
CTSKP43235 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.63■■□□□ 1.05
CTSKP43235 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.63■■□□□ 1.05
CTSKP43235 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSKP43235 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSKP43235 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CTSKP43235 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSKP43235 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTSKP43235 AC079630.1-202ENST00000618127 1840 ntBASIC21.62■■□□□ 1.05
CTSKP43235 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CTSKP43235 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSKP43235 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSKP43235 CDCA4P2-201ENST00000441182 718 ntBASIC21.62■■□□□ 1.05
CTSKP43235 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.62■■□□□ 1.05
CTSKP43235 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.62■■□□□ 1.05
CTSKP43235 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.62■■□□□ 1.05
CTSKP43235 AC073111.5-205ENST00000641717 521 ntBASIC21.62■■□□□ 1.05
CTSKP43235 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSKP43235 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSKP43235 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSKP43235 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSKP43235 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSKP43235 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.61■■□□□ 1.05
CTSKP43235 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSKP43235 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSKP43235 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.61■■□□□ 1.05
CTSKP43235 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.61■■□□□ 1.05
CTSKP43235 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSKP43235 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CTSKP43235 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CTSKP43235 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSKP43235 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.61■■□□□ 1.05
CTSKP43235 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSKP43235 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.6■■□□□ 1.05
CTSKP43235 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.6■■□□□ 1.05
CTSKP43235 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CTSKP43235 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSKP43235 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.6■■□□□ 1.05
CTSKP43235 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.6■■□□□ 1.05
CTSKP43235 SMUG1P1-201ENST00000590640 811 ntBASIC21.6■■□□□ 1.05
CTSKP43235 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSKP43235 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSKP43235 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CTSKP43235 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSKP43235 AC010141.3-201ENST00000456659 717 ntBASIC21.59■■□□□ 1.05
CTSKP43235 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.59■■□□□ 1.05
CTSKP43235 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSKP43235 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms