Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPL3P39023 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.64■□□□□ 0.89
RPL3P39023 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.63■□□□□ 0.89
RPL3P39023 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
RPL3P39023 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RPL3P39023 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL3P39023 AC006455.2-201ENST00000429931 906 ntBASIC20.63■□□□□ 0.89
RPL3P39023 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.63■□□□□ 0.89
RPL3P39023 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL3P39023 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL3P39023 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL3P39023 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.63■□□□□ 0.89
RPL3P39023 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL3P39023 CLDN5-201ENST00000403084 2357 ntBASIC20.63■□□□□ 0.89
RPL3P39023 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.62■□□□□ 0.89
RPL3P39023 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.62■□□□□ 0.89
RPL3P39023 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RPL3P39023 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.62■□□□□ 0.89
RPL3P39023 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPL3P39023 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPL3P39023 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPL3P39023 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPL3P39023 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPL3P39023 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPL3P39023 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.61■□□□□ 0.89
RPL3P39023 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPL3P39023 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPL3P39023 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
RPL3P39023 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 OR2I1P-207ENST00000453522 948 ntBASIC20.6■□□□□ 0.89
RPL3P39023 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.6■□□□□ 0.89
RPL3P39023 AC087239.1-201ENST00000622671 572 ntBASIC20.6■□□□□ 0.89
RPL3P39023 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPL3P39023 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL3P39023 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.6■□□□□ 0.89
RPL3P39023 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPL3P39023 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL3P39023 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL3P39023 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL3P39023 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
RPL3P39023 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPL3P39023 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL3P39023 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPL3P39023 AC079089.2-201ENST00000531211 1277 ntBASIC20.59■□□□□ 0.89
RPL3P39023 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.59■□□□□ 0.89
RPL3P39023 MIR3181-201ENST00000578512 73 ntBASIC20.59■□□□□ 0.89
RPL3P39023 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RPL3P39023 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL3P39023 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RPL3P39023 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RPL3P39023 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL3P39023 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.58■□□□□ 0.89
RPL3P39023 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL3P39023 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.58■□□□□ 0.89
RPL3P39023 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.58■□□□□ 0.89
RPL3P39023 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.58■□□□□ 0.88
RPL3P39023 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RPL3P39023 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.58■□□□□ 0.88
RPL3P39023 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPL3P39023 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPL3P39023 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPL3P39023 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.58■□□□□ 0.88
RPL3P39023 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPL3P39023 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
RPL3P39023 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL3P39023 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RPL3P39023 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL3P39023 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL3P39023 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL3P39023 DUX4L19-201ENST00000557448 1267 ntBASIC20.57■□□□□ 0.88
RPL3P39023 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL3P39023 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms