Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DPA1P20036 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.95■■□□□ 1.1
HLA-DPA1P20036 AC010141.3-201ENST00000456659 717 ntBASIC21.95■■□□□ 1.1
HLA-DPA1P20036 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DPA1P20036 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DPA1P20036 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DPA1P20036 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 AC233992.3-201ENST00000607491 485 ntBASIC21.94■■□□□ 1.1
HLA-DPA1P20036 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 LINC00526-201ENST00000581067 1875 ntBASIC21.94■■□□□ 1.1
HLA-DPA1P20036 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPA1P20036 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 EDA-201ENST00000338901 1233 ntBASIC21.93■■□□□ 1.1
HLA-DPA1P20036 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 AC079089.2-201ENST00000531211 1277 ntBASIC21.93■■□□□ 1.1
HLA-DPA1P20036 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPA1P20036 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 AC079834.2-201ENST00000609776 1949 ntBASIC21.92■■□□□ 1.1
HLA-DPA1P20036 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.92■■□□□ 1.1
HLA-DPA1P20036 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 AL139246.5-201ENST00000606645 996 ntBASIC21.91■■□□□ 1.1
HLA-DPA1P20036 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPA1P20036 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 AC092053.2-201ENST00000640557 1818 ntBASIC21.9■■□□□ 1.1
HLA-DPA1P20036 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.9■■□□□ 1.1
HLA-DPA1P20036 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DPA1P20036 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.89■■□□□ 1.1
HLA-DPA1P20036 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.89■■□□□ 1.1
HLA-DPA1P20036 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.89■■□□□ 1.1
HLA-DPA1P20036 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DPA1P20036 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DPA1P20036 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DPA1P20036 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DPA1P20036 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.89■■□□□ 1.09
HLA-DPA1P20036 AC027682.1-201ENST00000562846 899 ntBASIC21.89■■□□□ 1.09
HLA-DPA1P20036 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms