Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.7■□□□□ 0.74
CD53P19397 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
CD53P19397 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 AL024507.2-201ENST00000606070 2574 ntBASIC19.69■□□□□ 0.74
CD53P19397 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD53P19397 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD53P19397 AC092171.4-201ENST00000609130 632 ntBASIC19.69■□□□□ 0.74
CD53P19397 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD53P19397 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CD53P19397 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CD53P19397 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 MIR4767-201ENST00000582827 78 ntBASIC19.68■□□□□ 0.74
CD53P19397 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD53P19397 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD53P19397 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.67■□□□□ 0.74
CD53P19397 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CD53P19397 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CD53P19397 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD53P19397 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD53P19397 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 AC087623.3-201ENST00000607047 1098 ntBASIC19.66■□□□□ 0.74
CD53P19397 CA15P2-201ENST00000611168 834 ntBASIC19.66■□□□□ 0.74
CD53P19397 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.66■□□□□ 0.74
CD53P19397 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD53P19397 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
CD53P19397 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
CD53P19397 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD53P19397 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD53P19397 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD53P19397 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CD53P19397 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.65■□□□□ 0.74
CD53P19397 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.65■□□□□ 0.74
CD53P19397 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.65■□□□□ 0.74
CD53P19397 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.65■□□□□ 0.74
CD53P19397 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CD53P19397 RASA4CP-201ENST00000424092 1398 ntBASIC19.65■□□□□ 0.74
CD53P19397 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.64■□□□□ 0.74
CD53P19397 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD53P19397 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
CD53P19397 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.64■□□□□ 0.73
CD53P19397 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 AL162430.1-201ENST00000480705 870 ntBASIC19.64■□□□□ 0.73
CD53P19397 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.64■□□□□ 0.73
CD53P19397 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD53P19397 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.63■□□□□ 0.73
CD53P19397 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CD53P19397 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
CD53P19397 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
CD53P19397 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.63■□□□□ 0.73
CD53P19397 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD53P19397 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CD53P19397 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.62■□□□□ 0.73
CD53P19397 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms