Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.48■□□□□ 0.71
MRPL3P09001 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.48■□□□□ 0.71
MRPL3P09001 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.48■□□□□ 0.71
MRPL3P09001 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
MRPL3P09001 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL3P09001 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MRPL3P09001 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.47■□□□□ 0.71
MRPL3P09001 AL024507.2-201ENST00000606070 2574 ntBASIC19.47■□□□□ 0.71
MRPL3P09001 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPL3P09001 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPL3P09001 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPL3P09001 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
MRPL3P09001 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.47■□□□□ 0.71
MRPL3P09001 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.47■□□□□ 0.71
MRPL3P09001 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL3P09001 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPL3P09001 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
MRPL3P09001 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MRPL3P09001 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MRPL3P09001 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.46■□□□□ 0.71
MRPL3P09001 AC009102.2-201ENST00000606772 1639 ntBASIC19.46■□□□□ 0.71
MRPL3P09001 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPL3P09001 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL3P09001 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL3P09001 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.45■□□□□ 0.7
MRPL3P09001 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.45■□□□□ 0.7
MRPL3P09001 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL3P09001 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL3P09001 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL3P09001 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL3P09001 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPL3P09001 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
MRPL3P09001 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.44■□□□□ 0.7
MRPL3P09001 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MRPL3P09001 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
MRPL3P09001 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL3P09001 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MRPL3P09001 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL3P09001 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.43■□□□□ 0.7
MRPL3P09001 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MRPL3P09001 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.43■□□□□ 0.7
MRPL3P09001 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.42■□□□□ 0.7
MRPL3P09001 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.42■□□□□ 0.7
MRPL3P09001 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MRPL3P09001 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.42■□□□□ 0.7
MRPL3P09001 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MRPL3P09001 MTDHP2-201ENST00000601468 714 ntBASIC19.42■□□□□ 0.7
MRPL3P09001 AC092028.1-203ENST00000608262 953 ntBASIC19.42■□□□□ 0.7
MRPL3P09001 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPL3P09001 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPL3P09001 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL3P09001 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
MRPL3P09001 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.42■□□□□ 0.7
MRPL3P09001 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.41■□□□□ 0.7
MRPL3P09001 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MRPL3P09001 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms