Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.11■■■□□ 2.25
COL5A2P05997 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
COL5A2P05997 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL5A2P05997 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL5A2P05997 AL353803.4-201ENST00000565882 1934 ntBASIC29.11■■■□□ 2.25
COL5A2P05997 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
COL5A2P05997 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
COL5A2P05997 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
COL5A2P05997 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.1■■■□□ 2.25
COL5A2P05997 AC073210.2-201ENST00000430369 194 ntBASIC29.1■■■□□ 2.25
COL5A2P05997 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.1■■■□□ 2.25
COL5A2P05997 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
COL5A2P05997 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.1■■■□□ 2.25
COL5A2P05997 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL5A2P05997 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.09■■■□□ 2.25
COL5A2P05997 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
COL5A2P05997 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.09■■■□□ 2.25
COL5A2P05997 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.09■■■□□ 2.25
COL5A2P05997 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
COL5A2P05997 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL5A2P05997 AC009237.3-201ENST00000393279 1427 ntBASIC29.08■■■□□ 2.25
COL5A2P05997 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL5A2P05997 AC093827.2-201ENST00000512654 315 ntBASIC29.08■■■□□ 2.25
COL5A2P05997 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
COL5A2P05997 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL5A2P05997 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL5A2P05997 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL5A2P05997 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
COL5A2P05997 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL5A2P05997 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.07■■■□□ 2.24
COL5A2P05997 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.06■■■□□ 2.24
COL5A2P05997 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL5A2P05997 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
COL5A2P05997 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL5A2P05997 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL5A2P05997 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.06■■■□□ 2.24
COL5A2P05997 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
COL5A2P05997 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL5A2P05997 DET1-205ENST00000558413 583 ntTSL 4 BASIC29.05■■■□□ 2.24
COL5A2P05997 AC008687.6-201ENST00000596318 630 ntBASIC29.05■■■□□ 2.24
COL5A2P05997 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL5A2P05997 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL5A2P05997 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.05■■■□□ 2.24
COL5A2P05997 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.05■■■□□ 2.24
COL5A2P05997 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL5A2P05997 AC133552.2-202ENST00000575694 574 ntBASIC29.04■■■□□ 2.24
COL5A2P05997 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.04■■■□□ 2.24
COL5A2P05997 AP001160.3-201ENST00000601484 763 ntBASIC29.04■■■□□ 2.24
COL5A2P05997 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.04■■■□□ 2.24
COL5A2P05997 TBCB-214ENST00000629269 413 ntTSL 5 BASIC29.04■■■□□ 2.24
COL5A2P05997 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
COL5A2P05997 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
COL5A2P05997 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL5A2P05997 DUSP8P3-201ENST00000399571 1760 ntBASIC29.04■■■□□ 2.24
COL5A2P05997 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL5A2P05997 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL5A2P05997 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC29.04■■■□□ 2.24
COL5A2P05997 AF201337.1-201ENST00000520239 748 ntBASIC29.04■■■□□ 2.24
COL5A2P05997 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.04■■■□□ 2.24
COL5A2P05997 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
COL5A2P05997 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
COL5A2P05997 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.03■■■□□ 2.24
COL5A2P05997 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.03■■■□□ 2.24
COL5A2P05997 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
COL5A2P05997 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC29.03■■■□□ 2.24
COL5A2P05997 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.03■■■□□ 2.24
COL5A2P05997 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 AC133041.1-202ENST00000642053 222 ntBASIC29.03■■■□□ 2.24
COL5A2P05997 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL5A2P05997 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL5A2P05997 LINC00543-201ENST00000567234 1845 ntBASIC29.02■■■□□ 2.24
COL5A2P05997 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.02■■■□□ 2.24
COL5A2P05997 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL5A2P05997 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.02■■■□□ 2.24
COL5A2P05997 FAM201B-201ENST00000458407 597 ntBASIC29.02■■■□□ 2.24
COL5A2P05997 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
COL5A2P05997 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
COL5A2P05997 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
COL5A2P05997 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL5A2P05997 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL5A2P05997 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL5A2P05997 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL5A2P05997 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.01■■■□□ 2.23
COL5A2P05997 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL5A2P05997 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
COL5A2P05997 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29■■■□□ 2.23
COL5A2P05997 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29■■■□□ 2.23
COL5A2P05997 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
COL5A2P05997 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms