Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGBP05060 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.27■■□□□ 1.8
CHGBP05060 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.27■■□□□ 1.8
CHGBP05060 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.27■■□□□ 1.8
CHGBP05060 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 LINC00526-201ENST00000581067 1875 ntBASIC26.27■■□□□ 1.8
CHGBP05060 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
CHGBP05060 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.27■■□□□ 1.8
CHGBP05060 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGBP05060 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHGBP05060 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.26■■□□□ 1.79
CHGBP05060 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CHGBP05060 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.26■■□□□ 1.79
CHGBP05060 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.26■■□□□ 1.79
CHGBP05060 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.26■■□□□ 1.79
CHGBP05060 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGBP05060 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHGBP05060 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.25■■□□□ 1.79
CHGBP05060 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.25■■□□□ 1.79
CHGBP05060 SMUG1P1-201ENST00000590640 811 ntBASIC26.25■■□□□ 1.79
CHGBP05060 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CHGBP05060 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGBP05060 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHGBP05060 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHGBP05060 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.24■■□□□ 1.79
CHGBP05060 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.24■■□□□ 1.79
CHGBP05060 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.24■■□□□ 1.79
CHGBP05060 AC233723.2-201ENST00000623798 2106 ntBASIC26.24■■□□□ 1.79
CHGBP05060 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHGBP05060 OXCT2P1-201ENST00000447263 1535 ntBASIC26.24■■□□□ 1.79
CHGBP05060 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.23■■□□□ 1.79
CHGBP05060 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.23■■□□□ 1.79
CHGBP05060 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.23■■□□□ 1.79
CHGBP05060 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.23■■□□□ 1.79
CHGBP05060 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHGBP05060 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.23■■□□□ 1.79
CHGBP05060 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.23■■□□□ 1.79
CHGBP05060 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
CHGBP05060 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHGBP05060 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHGBP05060 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CHGBP05060 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.22■■□□□ 1.79
CHGBP05060 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.22■■□□□ 1.79
CHGBP05060 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHGBP05060 AC012414.1-201ENST00000556676 535 ntBASIC26.22■■□□□ 1.79
CHGBP05060 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.22■■□□□ 1.79
CHGBP05060 RARRES2P6-201ENST00000567333 442 ntBASIC26.22■■□□□ 1.79
CHGBP05060 AC105233.4-201ENST00000642045 216 ntBASIC26.22■■□□□ 1.79
CHGBP05060 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CHGBP05060 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.22■■□□□ 1.79
CHGBP05060 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHGBP05060 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.22■■□□□ 1.79
CHGBP05060 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHGBP05060 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
CHGBP05060 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CHGBP05060 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHGBP05060 AC139530.1-201ENST00000575312 1977 ntBASIC26.21■■□□□ 1.79
CHGBP05060 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHGBP05060 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.21■■□□□ 1.79
CHGBP05060 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHGBP05060 AC068587.7-201ENST00000641602 218 ntBASIC26.21■■□□□ 1.79
CHGBP05060 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.21■■□□□ 1.79
CHGBP05060 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.21■■□□□ 1.79
CHGBP05060 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.21■■□□□ 1.79
CHGBP05060 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.21■■□□□ 1.79
CHGBP05060 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHGBP05060 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHGBP05060 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHGBP05060 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CHGBP05060 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHGBP05060 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.2■■□□□ 1.78
CHGBP05060 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHGBP05060 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms