Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 DUSP8P5-201ENST00000422884 1815 ntBASIC19.88■□□□□ 0.77
P04436 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 BX005040.4-201ENST00000637145 1518 ntBASIC19.88■□□□□ 0.77
P04436 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
P04436 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.88■□□□□ 0.77
P04436 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.88■□□□□ 0.77
P04436 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.88■□□□□ 0.77
P04436 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.88■□□□□ 0.77
P04436 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04436 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
P04436 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04436 AL162430.1-201ENST00000480705 870 ntBASIC19.87■□□□□ 0.77
P04436 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.87■□□□□ 0.77
P04436 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.87■□□□□ 0.77
P04436 CCDC92B-201ENST00000575506 885 ntBASIC19.87■□□□□ 0.77
P04436 AC104564.3-201ENST00000582367 638 ntBASIC19.87■□□□□ 0.77
P04436 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
P04436 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
P04436 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
P04436 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
P04436 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
P04436 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.86■□□□□ 0.77
P04436 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04436 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
P04436 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
P04436 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.85■□□□□ 0.77
P04436 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 KRT18P14-201ENST00000534205 1250 ntBASIC19.85■□□□□ 0.77
P04436 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.85■□□□□ 0.77
P04436 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.85■□□□□ 0.77
P04436 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.85■□□□□ 0.77
P04436 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.85■□□□□ 0.77
P04436 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04436 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
P04436 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
P04436 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04436 AC079089.2-201ENST00000531211 1277 ntBASIC19.84■□□□□ 0.77
P04436 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
P04436 AC092666.2-201ENST00000613287 246 ntBASIC19.84■□□□□ 0.77
P04436 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
P04436 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.84■□□□□ 0.77
P04436 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
P04436 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
P04436 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.84■□□□□ 0.77
P04436 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04436 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04436 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
P04436 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P04436 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
P04436 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.83■□□□□ 0.77
P04436 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
P04436 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.83■□□□□ 0.77
P04436 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
P04436 DUX4L2-201ENST00000561772 1275 ntBASIC19.83■□□□□ 0.77
P04436 TERF1P2-201ENST00000583350 1212 ntBASIC19.83■□□□□ 0.77
P04436 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
P04436 DUX4L6-201ENST00000626483 1275 ntBASIC19.83■□□□□ 0.77
P04436 DUX4L1-201ENST00000627662 1275 ntBASIC19.83■□□□□ 0.77
P04436 DUX4L8-201ENST00000629013 1275 ntBASIC19.83■□□□□ 0.77
P04436 DUX4L3-201ENST00000630187 1275 ntBASIC19.83■□□□□ 0.77
P04436 DUX4L7-201ENST00000630678 1275 ntBASIC19.83■□□□□ 0.77
P04436 DUX4L5-201ENST00000630834 1275 ntBASIC19.83■□□□□ 0.77
P04436 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04436 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04436 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
P04436 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
P04436 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.83■□□□□ 0.76
P04436 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04436 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04436 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms