Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 C1orf229-201ENST00000623686 2258 ntBASIC21.55■■□□□ 1.04
SOD1P00441 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD1P00441 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD1P00441 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SOD1P00441 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD1P00441 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD1P00441 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SOD1P00441 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SOD1P00441 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.54■■□□□ 1.04
SOD1P00441 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SOD1P00441 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SOD1P00441 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SOD1P00441 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.53■■□□□ 1.04
SOD1P00441 AC123595.1-201ENST00000440769 1046 ntBASIC21.53■■□□□ 1.04
SOD1P00441 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.53■■□□□ 1.04
SOD1P00441 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.53■■□□□ 1.04
SOD1P00441 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.53■■□□□ 1.04
SOD1P00441 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SOD1P00441 AC137767.1-201ENST00000602918 1920 ntBASIC21.53■■□□□ 1.04
SOD1P00441 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SOD1P00441 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SOD1P00441 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOD1P00441 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SOD1P00441 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.52■■□□□ 1.04
SOD1P00441 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.52■■□□□ 1.04
SOD1P00441 AC079089.2-201ENST00000531211 1277 ntBASIC21.52■■□□□ 1.04
SOD1P00441 TPRG1LP1-201ENST00000598702 760 ntBASIC21.52■■□□□ 1.04
SOD1P00441 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.52■■□□□ 1.04
SOD1P00441 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SOD1P00441 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
SOD1P00441 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SOD1P00441 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SOD1P00441 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.51■■□□□ 1.03
SOD1P00441 MIR5787-201ENST00000611784 55 ntBASIC21.51■■□□□ 1.03
SOD1P00441 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SOD1P00441 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SOD1P00441 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.5■■□□□ 1.03
SOD1P00441 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SOD1P00441 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.5■■□□□ 1.03
SOD1P00441 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.5■■□□□ 1.03
SOD1P00441 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.5■■□□□ 1.03
SOD1P00441 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.5■■□□□ 1.03
SOD1P00441 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOD1P00441 LINC00526-201ENST00000581067 1875 ntBASIC21.49■■□□□ 1.03
SOD1P00441 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SOD1P00441 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.49■■□□□ 1.03
SOD1P00441 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L2-201ENST00000561772 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
SOD1P00441 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L6-201ENST00000626483 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L1-201ENST00000627662 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L8-201ENST00000629013 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L3-201ENST00000630187 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L7-201ENST00000630678 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 DUX4L5-201ENST00000630834 1275 ntBASIC21.49■■□□□ 1.03
SOD1P00441 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.49■■□□□ 1.03
SOD1P00441 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOD1P00441 BX005040.4-201ENST00000637145 1518 ntBASIC21.49■■□□□ 1.03
SOD1P00441 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOD1P00441 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOD1P00441 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SOD1P00441 CCDC92B-201ENST00000575506 885 ntBASIC21.48■■□□□ 1.03
SOD1P00441 TERF1P2-201ENST00000583350 1212 ntBASIC21.48■■□□□ 1.03
SOD1P00441 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SOD1P00441 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOD1P00441 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.48■■□□□ 1.03
SOD1P00441 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.48■■□□□ 1.03
SOD1P00441 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SOD1P00441 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SOD1P00441 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms