Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TOMM40O96008 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.98■□□□□ 0.31
TOMM40O96008 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.97■□□□□ 0.31
TOMM40O96008 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOMM40O96008 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.97■□□□□ 0.31
TOMM40O96008 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOMM40O96008 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOMM40O96008 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.97■□□□□ 0.31
TOMM40O96008 MIR6724-1-201ENST00000616420 92 ntBASIC16.97■□□□□ 0.31
TOMM40O96008 MIR6724-2-201ENST00000616483 92 ntBASIC16.97■□□□□ 0.31
TOMM40O96008 MIR6724-4-201ENST00000617390 92 ntBASIC16.97■□□□□ 0.31
TOMM40O96008 MIR6724-3-201ENST00000622482 92 ntBASIC16.97■□□□□ 0.31
TOMM40O96008 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOMM40O96008 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOMM40O96008 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
TOMM40O96008 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOMM40O96008 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TOMM40O96008 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.96■□□□□ 0.31
TOMM40O96008 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TOMM40O96008 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.96■□□□□ 0.31
TOMM40O96008 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 AL451085.2-201ENST00000605085 799 ntBASIC16.96■□□□□ 0.31
TOMM40O96008 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.96■□□□□ 0.31
TOMM40O96008 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.96■□□□□ 0.31
TOMM40O96008 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TOMM40O96008 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOMM40O96008 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TOMM40O96008 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOMM40O96008 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOMM40O96008 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOMM40O96008 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.96■□□□□ 0.3
TOMM40O96008 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOMM40O96008 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOMM40O96008 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TOMM40O96008 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.95■□□□□ 0.3
TOMM40O96008 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 AL499627.2-201ENST00000606283 725 ntBASIC16.95■□□□□ 0.3
TOMM40O96008 CA15P2-201ENST00000611168 834 ntBASIC16.95■□□□□ 0.3
TOMM40O96008 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOMM40O96008 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.95■□□□□ 0.3
TOMM40O96008 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TOMM40O96008 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TOMM40O96008 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
TOMM40O96008 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TOMM40O96008 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TOMM40O96008 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.94■□□□□ 0.3
TOMM40O96008 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.94■□□□□ 0.3
TOMM40O96008 AL117332.1-201ENST00000622628 974 ntBASIC16.94■□□□□ 0.3
TOMM40O96008 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.94■□□□□ 0.3
TOMM40O96008 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 AL137060.1-201ENST00000618151 2648 ntBASIC16.94■□□□□ 0.3
TOMM40O96008 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOMM40O96008 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.94■□□□□ 0.3
TOMM40O96008 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TOMM40O96008 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.93■□□□□ 0.3
TOMM40O96008 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
TOMM40O96008 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
TOMM40O96008 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TOMM40O96008 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOMM40O96008 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.93■□□□□ 0.3
TOMM40O96008 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TOMM40O96008 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOMM40O96008 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.92■□□□□ 0.3
TOMM40O96008 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TOMM40O96008 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOMM40O96008 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.92■□□□□ 0.3
TOMM40O96008 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOMM40O96008 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TOMM40O96008 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.92■□□□□ 0.3
TOMM40O96008 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.92■□□□□ 0.3
TOMM40O96008 UNC93B8-201ENST00000511903 705 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms