Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLDN1O95832 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN1O95832 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN1O95832 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN1O95832 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN1O95832 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLDN1O95832 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN1O95832 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN1O95832 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN1O95832 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN1O95832 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN1O95832 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN1O95832 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN1O95832 SLC29A4P1-201ENST00000398760 971 ntBASIC19.38■□□□□ 0.69
CLDN1O95832 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN1O95832 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.38■□□□□ 0.69
CLDN1O95832 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLDN1O95832 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN1O95832 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CLDN1O95832 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN1O95832 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN1O95832 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN1O95832 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN1O95832 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN1O95832 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN1O95832 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLDN1O95832 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLDN1O95832 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CLDN1O95832 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLDN1O95832 AC005181.1-201ENST00000604782 1256 ntBASIC19.37■□□□□ 0.69
CLDN1O95832 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 LINC01124-201ENST00000409786 2117 ntBASIC19.37■□□□□ 0.69
CLDN1O95832 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN1O95832 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN1O95832 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN1O95832 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN1O95832 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLDN1O95832 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN1O95832 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN1O95832 ITM2C-210ENST00000620962 501 ntBASIC19.36■□□□□ 0.69
CLDN1O95832 AC231657.2-201ENST00000624556 255 ntBASIC19.36■□□□□ 0.69
CLDN1O95832 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN1O95832 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.35■□□□□ 0.69
CLDN1O95832 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN1O95832 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN1O95832 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
CLDN1O95832 POU5F1P3-201ENST00000428824 1078 ntBASIC19.35■□□□□ 0.69
CLDN1O95832 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN1O95832 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.35■□□□□ 0.69
CLDN1O95832 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN1O95832 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN1O95832 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN1O95832 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN1O95832 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN1O95832 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN1O95832 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN1O95832 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLDN1O95832 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN1O95832 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLDN1O95832 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN1O95832 KRT18P29-201ENST00000397031 1267 ntBASIC19.34■□□□□ 0.69
CLDN1O95832 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN1O95832 AC007322.1-201ENST00000426983 750 ntBASIC19.34■□□□□ 0.69
CLDN1O95832 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN1O95832 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN1O95832 AC133041.1-202ENST00000642053 222 ntBASIC19.34■□□□□ 0.69
CLDN1O95832 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN1O95832 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLDN1O95832 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms