Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
CTNND1O60716 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CTNND1O60716 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.6■■□□□ 1.69
CTNND1O60716 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.6■■□□□ 1.69
CTNND1O60716 AC006970.2-201ENST00000450065 779 ntBASIC25.6■■□□□ 1.69
CTNND1O60716 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.6■■□□□ 1.69
CTNND1O60716 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 AC104771.1-201ENST00000603335 964 ntBASIC25.6■■□□□ 1.69
CTNND1O60716 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.6■■□□□ 1.69
CTNND1O60716 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CTNND1O60716 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CTNND1O60716 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CTNND1O60716 AC005224.4-201ENST00000583262 1652 ntBASIC25.59■■□□□ 1.69
CTNND1O60716 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.59■■□□□ 1.69
CTNND1O60716 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.59■■□□□ 1.69
CTNND1O60716 AC009237.3-201ENST00000393279 1427 ntBASIC25.59■■□□□ 1.69
CTNND1O60716 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.59■■□□□ 1.69
CTNND1O60716 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTNND1O60716 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTNND1O60716 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.58■■□□□ 1.69
CTNND1O60716 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTNND1O60716 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CTNND1O60716 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.58■■□□□ 1.69
CTNND1O60716 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CTNND1O60716 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
CTNND1O60716 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CTNND1O60716 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTNND1O60716 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTNND1O60716 NCF1B-203ENST00000435988 1254 ntBASIC25.57■■□□□ 1.68
CTNND1O60716 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.57■■□□□ 1.68
CTNND1O60716 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
CTNND1O60716 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.57■■□□□ 1.68
CTNND1O60716 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CTNND1O60716 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CTNND1O60716 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTNND1O60716 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTNND1O60716 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTNND1O60716 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.55■■□□□ 1.68
CTNND1O60716 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
CTNND1O60716 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CTNND1O60716 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CTNND1O60716 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CTNND1O60716 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.55■■□□□ 1.68
CTNND1O60716 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CTNND1O60716 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.55■■□□□ 1.68
CTNND1O60716 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTNND1O60716 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
CTNND1O60716 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.54■■□□□ 1.68
CTNND1O60716 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTNND1O60716 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.54■■□□□ 1.68
CTNND1O60716 AL109923.1-201ENST00000618799 583 ntBASIC25.54■■□□□ 1.68
CTNND1O60716 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTNND1O60716 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
CTNND1O60716 KRT87P-202ENST00000534226 1464 ntBASIC25.53■■□□□ 1.68
CTNND1O60716 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CTNND1O60716 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTNND1O60716 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTNND1O60716 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTNND1O60716 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTNND1O60716 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTNND1O60716 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.53■■□□□ 1.68
CTNND1O60716 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.53■■□□□ 1.68
CTNND1O60716 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CTNND1O60716 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CTNND1O60716 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTNND1O60716 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.52■■□□□ 1.68
CTNND1O60716 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTNND1O60716 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTNND1O60716 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.52■■□□□ 1.68
CTNND1O60716 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CTNND1O60716 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.52■■□□□ 1.68
CTNND1O60716 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
CTNND1O60716 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.52■■□□□ 1.68
CTNND1O60716 AC104187.1-201ENST00000607510 612 ntBASIC25.52■■□□□ 1.68
CTNND1O60716 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTNND1O60716 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.51■■□□□ 1.67
CTNND1O60716 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CTNND1O60716 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CTNND1O60716 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.51■■□□□ 1.67
CTNND1O60716 MFSD11-216ENST00000590393 1141 ntBASIC25.51■■□□□ 1.67
CTNND1O60716 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CTNND1O60716 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.51■■□□□ 1.67
CTNND1O60716 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CTNND1O60716 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CTNND1O60716 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CTNND1O60716 MIR663A-201ENST00000385250 93 ntBASIC25.5■■□□□ 1.67
CTNND1O60716 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CTNND1O60716 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.5■■□□□ 1.67
CTNND1O60716 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms