Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 BX088651.1-201ENST00000540551 451 ntBASIC21.52■■□□□ 1.04
GFRA3O60609 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.52■■□□□ 1.04
GFRA3O60609 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.52■■□□□ 1.04
GFRA3O60609 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.52■■□□□ 1.04
GFRA3O60609 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.52■■□□□ 1.04
GFRA3O60609 AC068338.2-201ENST00000563278 1430 ntBASIC21.52■■□□□ 1.04
GFRA3O60609 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFRA3O60609 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GFRA3O60609 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.51■■□□□ 1.03
GFRA3O60609 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GFRA3O60609 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.51■■□□□ 1.03
GFRA3O60609 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
GFRA3O60609 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.51■■□□□ 1.03
GFRA3O60609 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GFRA3O60609 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.51■■□□□ 1.03
GFRA3O60609 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.51■■□□□ 1.03
GFRA3O60609 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.51■■□□□ 1.03
GFRA3O60609 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.51■■□□□ 1.03
GFRA3O60609 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
GFRA3O60609 ERN1-208ENST00000606895 2068 ntBASIC21.51■■□□□ 1.03
GFRA3O60609 AC139426.1-201ENST00000568218 2529 ntBASIC21.51■■□□□ 1.03
GFRA3O60609 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.5■■□□□ 1.03
GFRA3O60609 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.5■■□□□ 1.03
GFRA3O60609 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.5■■□□□ 1.03
GFRA3O60609 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.5■■□□□ 1.03
GFRA3O60609 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.5■■□□□ 1.03
GFRA3O60609 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.5■■□□□ 1.03
GFRA3O60609 Z99916.2-201ENST00000604037 246 ntBASIC21.5■■□□□ 1.03
GFRA3O60609 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
GFRA3O60609 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GFRA3O60609 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GFRA3O60609 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GFRA3O60609 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GFRA3O60609 AL512625.2-201ENST00000417533 625 ntBASIC21.49■■□□□ 1.03
GFRA3O60609 AC091874.3-201ENST00000512672 1195 ntBASIC21.49■■□□□ 1.03
GFRA3O60609 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GFRA3O60609 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.49■■□□□ 1.03
GFRA3O60609 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.49■■□□□ 1.03
GFRA3O60609 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.49■■□□□ 1.03
GFRA3O60609 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.49■■□□□ 1.03
GFRA3O60609 AC016405.3-201ENST00000607710 860 ntBASIC21.49■■□□□ 1.03
GFRA3O60609 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GFRA3O60609 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GFRA3O60609 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.48■■□□□ 1.03
GFRA3O60609 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GFRA3O60609 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.48■■□□□ 1.03
GFRA3O60609 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
GFRA3O60609 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.48■■□□□ 1.03
GFRA3O60609 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.48■■□□□ 1.03
GFRA3O60609 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
GFRA3O60609 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GFRA3O60609 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.48■■□□□ 1.03
GFRA3O60609 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.48■■□□□ 1.03
GFRA3O60609 AC069236.1-201ENST00000604339 616 ntBASIC21.48■■□□□ 1.03
GFRA3O60609 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.48■■□□□ 1.03
GFRA3O60609 AC068587.7-201ENST00000641602 218 ntBASIC21.48■■□□□ 1.03
GFRA3O60609 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.48■■□□□ 1.03
GFRA3O60609 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GFRA3O60609 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GFRA3O60609 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.47■■□□□ 1.03
GFRA3O60609 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFRA3O60609 ARMC10P1-201ENST00000313754 855 ntBASIC21.47■■□□□ 1.03
GFRA3O60609 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.47■■□□□ 1.03
GFRA3O60609 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.47■■□□□ 1.03
GFRA3O60609 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFRA3O60609 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.47■■□□□ 1.03
GFRA3O60609 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GFRA3O60609 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFRA3O60609 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.46■■□□□ 1.03
GFRA3O60609 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 KRT18P35-201ENST00000510488 1269 ntBASIC21.46■■□□□ 1.03
GFRA3O60609 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.46■■□□□ 1.03
GFRA3O60609 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.46■■□□□ 1.03
GFRA3O60609 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFRA3O60609 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
GFRA3O60609 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 TERF1P5-201ENST00000477545 1207 ntBASIC21.45■■□□□ 1.02
GFRA3O60609 RPPH1-201ENST00000516869 333 ntBASIC21.45■■□□□ 1.02
GFRA3O60609 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.45■■□□□ 1.02
GFRA3O60609 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 AC133561.5-201ENST00000635547 218 ntBASIC21.45■■□□□ 1.02
GFRA3O60609 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms