Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.85■□□□□ 0.93
LCMT2O60294 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.85■□□□□ 0.93
LCMT2O60294 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.85■□□□□ 0.93
LCMT2O60294 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
LCMT2O60294 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LCMT2O60294 TSPY26P-201ENST00000476365 1326 ntBASIC20.84■□□□□ 0.93
LCMT2O60294 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LCMT2O60294 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.84■□□□□ 0.93
LCMT2O60294 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.84■□□□□ 0.93
LCMT2O60294 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.84■□□□□ 0.93
LCMT2O60294 IGHV3-19-201ENST00000521488 291 ntBASIC20.84■□□□□ 0.93
LCMT2O60294 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.84■□□□□ 0.93
LCMT2O60294 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LCMT2O60294 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LCMT2O60294 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
LCMT2O60294 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LCMT2O60294 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCMT2O60294 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.84■□□□□ 0.93
LCMT2O60294 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.84■□□□□ 0.93
LCMT2O60294 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LCMT2O60294 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.83■□□□□ 0.93
LCMT2O60294 AC139530.1-201ENST00000575312 1977 ntBASIC20.83■□□□□ 0.93
LCMT2O60294 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.83■□□□□ 0.93
LCMT2O60294 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LCMT2O60294 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 AC079089.2-201ENST00000531211 1277 ntBASIC20.83■□□□□ 0.93
LCMT2O60294 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 AC087239.1-201ENST00000622671 572 ntBASIC20.83■□□□□ 0.93
LCMT2O60294 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCMT2O60294 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
LCMT2O60294 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LCMT2O60294 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.83■□□□□ 0.92
LCMT2O60294 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LCMT2O60294 OXCT2P1-201ENST00000447263 1535 ntBASIC20.83■□□□□ 0.92
LCMT2O60294 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.82■□□□□ 0.92
LCMT2O60294 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
LCMT2O60294 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.82■□□□□ 0.92
LCMT2O60294 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.82■□□□□ 0.92
LCMT2O60294 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
LCMT2O60294 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LCMT2O60294 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCMT2O60294 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.81■□□□□ 0.92
LCMT2O60294 LINC00526-201ENST00000581067 1875 ntBASIC20.81■□□□□ 0.92
LCMT2O60294 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LCMT2O60294 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.81■□□□□ 0.92
LCMT2O60294 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
LCMT2O60294 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.81■□□□□ 0.92
LCMT2O60294 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.81■□□□□ 0.92
LCMT2O60294 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.81■□□□□ 0.92
LCMT2O60294 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
LCMT2O60294 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.81■□□□□ 0.92
LCMT2O60294 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.81■□□□□ 0.92
LCMT2O60294 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCMT2O60294 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 AL117328.2-201ENST00000624617 1940 ntBASIC20.8■□□□□ 0.92
LCMT2O60294 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 AC105265.2-201ENST00000467189 838 ntBASIC20.8■□□□□ 0.92
LCMT2O60294 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.8■□□□□ 0.92
LCMT2O60294 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.8■□□□□ 0.92
LCMT2O60294 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.8■□□□□ 0.92
LCMT2O60294 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCMT2O60294 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LCMT2O60294 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.79■□□□□ 0.92
LCMT2O60294 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.79■□□□□ 0.92
LCMT2O60294 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.79■□□□□ 0.92
LCMT2O60294 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LCMT2O60294 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms