Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGCEO43556 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGCEO43556 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SGCEO43556 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.15■□□□□ 0.66
SGCEO43556 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.15■□□□□ 0.66
SGCEO43556 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SGCEO43556 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGCEO43556 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SGCEO43556 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
SGCEO43556 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SGCEO43556 ECEL1P1-201ENST00000373592 1742 ntBASIC19.14■□□□□ 0.66
SGCEO43556 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.14■□□□□ 0.66
SGCEO43556 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SGCEO43556 RNF165-205ENST00000588679 2904 ntBASIC19.14■□□□□ 0.65
SGCEO43556 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SGCEO43556 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.14■□□□□ 0.65
SGCEO43556 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.14■□□□□ 0.65
SGCEO43556 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.14■□□□□ 0.65
SGCEO43556 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SGCEO43556 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCEO43556 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCEO43556 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 AL121603.2-201ENST00000557373 2117 ntBASIC19.13■□□□□ 0.65
SGCEO43556 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SGCEO43556 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCEO43556 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 AC008406.3-201ENST00000620001 1374 ntBASIC19.13■□□□□ 0.65
SGCEO43556 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SGCEO43556 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCEO43556 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SGCEO43556 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
SGCEO43556 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SGCEO43556 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 OR2I1P-207ENST00000453522 948 ntBASIC19.12■□□□□ 0.65
SGCEO43556 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.12■□□□□ 0.65
SGCEO43556 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 AC011298.3-201ENST00000615796 283 ntBASIC19.12■□□□□ 0.65
SGCEO43556 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCEO43556 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SGCEO43556 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.11■□□□□ 0.65
SGCEO43556 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SGCEO43556 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SGCEO43556 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.11■□□□□ 0.65
SGCEO43556 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.11■□□□□ 0.65
SGCEO43556 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SGCEO43556 AC080038.3-201ENST00000623346 1952 ntBASIC19.11■□□□□ 0.65
SGCEO43556 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 EP400NL-214ENST00000641289 2402 ntBASIC19.11■□□□□ 0.65
SGCEO43556 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.11■□□□□ 0.65
SGCEO43556 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCEO43556 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.1■□□□□ 0.65
SGCEO43556 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.1■□□□□ 0.65
SGCEO43556 LINC00526-201ENST00000581067 1875 ntBASIC19.1■□□□□ 0.65
SGCEO43556 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCEO43556 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCEO43556 AC136469.2-201ENST00000623944 1028 ntBASIC19.1■□□□□ 0.65
SGCEO43556 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGCEO43556 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SGCEO43556 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCEO43556 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SGCEO43556 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCEO43556 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SGCEO43556 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SGCEO43556 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.09■□□□□ 0.65
SGCEO43556 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.09■□□□□ 0.65
SGCEO43556 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SGCEO43556 CA15P2-201ENST00000611168 834 ntBASIC19.09■□□□□ 0.65
SGCEO43556 AL031602.1-201ENST00000633169 911 ntBASIC19.09■□□□□ 0.65
SGCEO43556 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.09■□□□□ 0.65
SGCEO43556 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SGCEO43556 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms