Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRANK1O15050 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRANK1O15050 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRANK1O15050 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.23■■□□□ 1.31
TRANK1O15050 AC133041.1-202ENST00000642053 222 ntBASIC23.23■■□□□ 1.31
TRANK1O15050 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.23■■□□□ 1.31
TRANK1O15050 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.23■■□□□ 1.31
TRANK1O15050 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRANK1O15050 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRANK1O15050 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.22■■□□□ 1.31
TRANK1O15050 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.22■■□□□ 1.31
TRANK1O15050 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.22■■□□□ 1.31
TRANK1O15050 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRANK1O15050 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TRANK1O15050 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRANK1O15050 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.22■■□□□ 1.31
TRANK1O15050 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRANK1O15050 AC010536.3-201ENST00000620306 533 ntBASIC23.22■■□□□ 1.31
TRANK1O15050 MYCNOS-205ENST00000641950 531 ntBASIC23.22■■□□□ 1.31
TRANK1O15050 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRANK1O15050 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TRANK1O15050 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.21■■□□□ 1.31
TRANK1O15050 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRANK1O15050 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.21■■□□□ 1.31
TRANK1O15050 AL596275.1-201ENST00000423464 877 ntBASIC23.21■■□□□ 1.31
TRANK1O15050 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.21■■□□□ 1.31
TRANK1O15050 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRANK1O15050 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
TRANK1O15050 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.2■■□□□ 1.3
TRANK1O15050 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRANK1O15050 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRANK1O15050 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
TRANK1O15050 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.2■■□□□ 1.3
TRANK1O15050 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRANK1O15050 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRANK1O15050 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRANK1O15050 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 RNA5SP413-201ENST00000516373 109 ntBASIC23.19■■□□□ 1.3
TRANK1O15050 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRANK1O15050 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TRANK1O15050 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
TRANK1O15050 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 AC005224.4-201ENST00000583262 1652 ntBASIC23.19■■□□□ 1.3
TRANK1O15050 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.19■■□□□ 1.3
TRANK1O15050 AC079630.1-202ENST00000618127 1840 ntBASIC23.19■■□□□ 1.3
TRANK1O15050 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRANK1O15050 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRANK1O15050 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRANK1O15050 MKRN4P-201ENST00000444706 1521 ntBASIC23.18■■□□□ 1.3
TRANK1O15050 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRANK1O15050 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.18■■□□□ 1.3
TRANK1O15050 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRANK1O15050 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TRANK1O15050 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.17■■□□□ 1.3
TRANK1O15050 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.17■■□□□ 1.3
TRANK1O15050 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.17■■□□□ 1.3
TRANK1O15050 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.17■■□□□ 1.3
TRANK1O15050 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRANK1O15050 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRANK1O15050 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.16■■□□□ 1.3
TRANK1O15050 AC007322.4-201ENST00000509611 723 ntBASIC23.16■■□□□ 1.3
TRANK1O15050 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.16■■□□□ 1.3
TRANK1O15050 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TRANK1O15050 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 AC006058.3-201ENST00000606217 1069 ntBASIC23.16■■□□□ 1.3
TRANK1O15050 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRANK1O15050 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRANK1O15050 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.16■■□□□ 1.3
TRANK1O15050 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRANK1O15050 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.15■■□□□ 1.3
TRANK1O15050 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.15■■□□□ 1.3
TRANK1O15050 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRANK1O15050 MIR4758-201ENST00000577688 71 ntBASIC23.15■■□□□ 1.3
TRANK1O15050 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.15■■□□□ 1.3
TRANK1O15050 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRANK1O15050 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRANK1O15050 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms