Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBFD1O14562 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UBFD1O14562 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
UBFD1O14562 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBFD1O14562 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UBFD1O14562 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBFD1O14562 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
UBFD1O14562 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.15■□□□□ 0.98
UBFD1O14562 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBFD1O14562 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
UBFD1O14562 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBFD1O14562 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.14■□□□□ 0.98
UBFD1O14562 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.14■□□□□ 0.98
UBFD1O14562 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.14■□□□□ 0.98
UBFD1O14562 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
UBFD1O14562 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.14■□□□□ 0.97
UBFD1O14562 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBFD1O14562 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
UBFD1O14562 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.13■□□□□ 0.97
UBFD1O14562 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.13■□□□□ 0.97
UBFD1O14562 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
UBFD1O14562 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.13■□□□□ 0.97
UBFD1O14562 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBFD1O14562 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.12■□□□□ 0.97
UBFD1O14562 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.12■□□□□ 0.97
UBFD1O14562 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
UBFD1O14562 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 AC006455.2-201ENST00000429931 906 ntBASIC21.12■□□□□ 0.97
UBFD1O14562 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UBFD1O14562 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
UBFD1O14562 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
UBFD1O14562 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.12■□□□□ 0.97
UBFD1O14562 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBFD1O14562 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
UBFD1O14562 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
UBFD1O14562 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.11■□□□□ 0.97
UBFD1O14562 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
UBFD1O14562 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.11■□□□□ 0.97
UBFD1O14562 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.11■□□□□ 0.97
UBFD1O14562 AL031602.1-201ENST00000633169 911 ntBASIC21.11■□□□□ 0.97
UBFD1O14562 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UBFD1O14562 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBFD1O14562 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
UBFD1O14562 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBFD1O14562 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UBFD1O14562 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBFD1O14562 AC241377.3-202ENST00000626088 1088 ntBASIC21.1■□□□□ 0.97
UBFD1O14562 AC241585.3-202ENST00000628937 1088 ntBASIC21.1■□□□□ 0.97
UBFD1O14562 AC245100.8-202ENST00000629247 1058 ntBASIC21.1■□□□□ 0.97
UBFD1O14562 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.1■□□□□ 0.97
UBFD1O14562 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBFD1O14562 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.09■□□□□ 0.97
UBFD1O14562 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBFD1O14562 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.09■□□□□ 0.97
UBFD1O14562 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.09■□□□□ 0.97
UBFD1O14562 AC244015.2-201ENST00000616358 1861 ntBASIC21.09■□□□□ 0.97
UBFD1O14562 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.09■□□□□ 0.97
UBFD1O14562 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.09■□□□□ 0.97
UBFD1O14562 AC133637.1-201ENST00000624115 1537 ntBASIC21.09■□□□□ 0.97
UBFD1O14562 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.09■□□□□ 0.97
UBFD1O14562 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.08■□□□□ 0.97
UBFD1O14562 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.08■□□□□ 0.97
UBFD1O14562 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBFD1O14562 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms