Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA1AO00555 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA1AO00555 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CACNA1AO00555 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CACNA1AO00555 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1AO00555 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1AO00555 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1AO00555 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1AO00555 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1AO00555 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CACNA1AO00555 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CACNA1AO00555 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1AO00555 RPPH1-201ENST00000516869 333 ntBASIC20.94■□□□□ 0.94
CACNA1AO00555 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.93■□□□□ 0.94
CACNA1AO00555 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.93■□□□□ 0.94
CACNA1AO00555 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CACNA1AO00555 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CACNA1AO00555 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA1AO00555 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1AO00555 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA1AO00555 AC016405.3-201ENST00000607710 860 ntBASIC20.93■□□□□ 0.94
CACNA1AO00555 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1AO00555 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1AO00555 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1AO00555 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1AO00555 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CACNA1AO00555 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA1AO00555 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1AO00555 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1AO00555 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA1AO00555 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1AO00555 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CACNA1AO00555 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1AO00555 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.91■□□□□ 0.94
CACNA1AO00555 POU5F1P4-201ENST00000413175 1085 ntBASIC20.91■□□□□ 0.94
CACNA1AO00555 AC093787.1-201ENST00000450396 207 ntBASIC20.91■□□□□ 0.94
CACNA1AO00555 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNA1AO00555 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1AO00555 CD177P1-201ENST00000606252 935 ntBASIC20.91■□□□□ 0.94
CACNA1AO00555 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1AO00555 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1AO00555 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1AO00555 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNA1AO00555 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1AO00555 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA1AO00555 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1AO00555 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.89■□□□□ 0.94
CACNA1AO00555 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA1AO00555 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CACNA1AO00555 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA1AO00555 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1AO00555 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CACNA1AO00555 AC133561.5-201ENST00000635547 218 ntBASIC20.89■□□□□ 0.93
CACNA1AO00555 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1AO00555 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.93
CACNA1AO00555 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNA1AO00555 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1AO00555 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CACNA1AO00555 PRKY-204ENST00000533551 1019 ntBASIC20.88■□□□□ 0.93
CACNA1AO00555 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1AO00555 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.88■□□□□ 0.93
CACNA1AO00555 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1AO00555 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNA1AO00555 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1AO00555 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.88■□□□□ 0.93
CACNA1AO00555 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1AO00555 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1AO00555 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1AO00555 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.87■□□□□ 0.93
CACNA1AO00555 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms