Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF223E7ERA6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF223E7ERA6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RNF223E7ERA6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 KRT18P6-201ENST00000555540 1265 ntBASIC18.12■□□□□ 0.49
RNF223E7ERA6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF223E7ERA6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 AC005181.1-201ENST00000604782 1256 ntBASIC18.12■□□□□ 0.49
RNF223E7ERA6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 KRT87P-202ENST00000534226 1464 ntBASIC18.12■□□□□ 0.49
RNF223E7ERA6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF223E7ERA6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF223E7ERA6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF223E7ERA6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 SLC29A4P1-201ENST00000398760 971 ntBASIC18.1■□□□□ 0.49
RNF223E7ERA6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 UBE2DNL-204ENST00000602536 740 ntBASIC18.1■□□□□ 0.49
RNF223E7ERA6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.1■□□□□ 0.49
RNF223E7ERA6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF223E7ERA6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF223E7ERA6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 AC005224.4-201ENST00000583262 1652 ntBASIC18.09■□□□□ 0.49
RNF223E7ERA6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 DUX4L16-201ENST00000555130 1264 ntBASIC18.09■□□□□ 0.49
RNF223E7ERA6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 AL138781.1-201ENST00000566567 1274 ntBASIC18.09■□□□□ 0.49
RNF223E7ERA6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF223E7ERA6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF223E7ERA6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF223E7ERA6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF223E7ERA6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF223E7ERA6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF223E7ERA6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF223E7ERA6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF223E7ERA6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF223E7ERA6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF223E7ERA6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF223E7ERA6 GUSBP6-202ENST00000438529 1198 ntBASIC18.07■□□□□ 0.48
RNF223E7ERA6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF223E7ERA6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF223E7ERA6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.07■□□□□ 0.48
RNF223E7ERA6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF223E7ERA6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF223E7ERA6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF223E7ERA6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF223E7ERA6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF223E7ERA6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms