Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 AC135279.3-201ENST00000610945 1311 ntBASIC20.24■□□□□ 0.83
CLCA1A8K7I4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLCA1A8K7I4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.23■□□□□ 0.83
CLCA1A8K7I4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 SYT6-210ENST00000641643 1587 ntBASIC20.23■□□□□ 0.83
CLCA1A8K7I4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCA1A8K7I4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 AC024257.2-201ENST00000549699 147 ntBASIC20.22■□□□□ 0.83
CLCA1A8K7I4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCA1A8K7I4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCA1A8K7I4 AC079630.1-202ENST00000618127 1840 ntBASIC20.2■□□□□ 0.82
CLCA1A8K7I4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 AC241377.3-202ENST00000626088 1088 ntBASIC20.2■□□□□ 0.82
CLCA1A8K7I4 AC241585.3-202ENST00000628937 1088 ntBASIC20.2■□□□□ 0.82
CLCA1A8K7I4 AC245100.8-202ENST00000629247 1058 ntBASIC20.2■□□□□ 0.82
CLCA1A8K7I4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CLCA1A8K7I4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCA1A8K7I4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms