Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 AC087239.1-201ENST00000622671 572 ntBASIC17.19■□□□□ 0.34
LINC01548A6NM66 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 OXCT2P1-201ENST00000447263 1535 ntBASIC17.18■□□□□ 0.34
LINC01548A6NM66 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 MIR6084-201ENST00000622012 110 ntBASIC17.18■□□□□ 0.34
LINC01548A6NM66 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01548A6NM66 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LINC01548A6NM66 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LINC01548A6NM66 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01548A6NM66 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01548A6NM66 AC105233.4-201ENST00000642045 216 ntBASIC17.17■□□□□ 0.34
LINC01548A6NM66 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LINC01548A6NM66 AC137767.1-201ENST00000602918 1920 ntBASIC17.17■□□□□ 0.34
LINC01548A6NM66 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01548A6NM66 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LINC01548A6NM66 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LINC01548A6NM66 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.16■□□□□ 0.34
LINC01548A6NM66 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01548A6NM66 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 SMUG1P1-201ENST00000590640 811 ntBASIC17.15■□□□□ 0.34
LINC01548A6NM66 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LINC01548A6NM66 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01548A6NM66 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
LINC01548A6NM66 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01548A6NM66 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01548A6NM66 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01548A6NM66 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01548A6NM66 AC079089.2-201ENST00000531211 1277 ntBASIC17.14■□□□□ 0.33
LINC01548A6NM66 AC012414.1-201ENST00000556676 535 ntBASIC17.14■□□□□ 0.33
LINC01548A6NM66 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 AC080038.3-201ENST00000623346 1952 ntBASIC17.14■□□□□ 0.33
LINC01548A6NM66 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LINC01548A6NM66 LINC00526-201ENST00000581067 1875 ntBASIC17.14■□□□□ 0.33
LINC01548A6NM66 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms