Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 AP002414.2-202ENST00000590929 1450 ntBASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 FER1L4-210ENST00000615531 5998 ntBASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.18■□□□□ 0.34
PCP4L1A6NKN8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCP4L1A6NKN8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.16■□□□□ 0.34
PCP4L1A6NKN8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PCP4L1A6NKN8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCP4L1A6NKN8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCP4L1A6NKN8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCP4L1A6NKN8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PCP4L1A6NKN8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCP4L1A6NKN8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.12■□□□□ 0.33
PCP4L1A6NKN8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PCP4L1A6NKN8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms