Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 CDCA4P2-201ENST00000441182 718 ntBASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-6A6NCS4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 AP004607.4-201ENST00000530158 1459 ntBASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NKX2-6A6NCS4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-6A6NCS4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.33■□□□□ 0.69
NKX2-6A6NCS4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.33■□□□□ 0.69
NKX2-6A6NCS4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 RAP2CP1-201ENST00000605103 478 ntBASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-6A6NCS4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 BX005040.4-201ENST00000637145 1518 ntBASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-6A6NCS4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 AC079630.1-202ENST00000618127 1840 ntBASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-6A6NCS4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 AC026185.1-201ENST00000445748 174 ntBASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-6A6NCS4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms