Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AC091305.1-201ENST00000479476 895 ntBASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC196A0A1B0GTZ2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC196A0A1B0GTZ2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.64
CCDC196A0A1B0GTZ2 RASA4CP-201ENST00000424092 1398 ntBASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 SUDS3P1-201ENST00000505831 966 ntBASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 AF213884.3-201ENST00000563833 479 ntBASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 AL136967.2-201ENST00000623968 743 ntBASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC196A0A1B0GTZ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC196A0A1B0GTZ2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 IGHV3-19-201ENST00000521488 291 ntBASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.3■■□□□ 1.64
CCDC196A0A1B0GTZ2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC196A0A1B0GTZ2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 AC005837.3-201ENST00000612163 286 ntBASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC196A0A1B0GTZ2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 MIR638-201ENST00000385237 100 ntBASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 AC142381.2-201ENST00000566120 298 ntBASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC196A0A1B0GTZ2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 LINC00526-201ENST00000581067 1875 ntBASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC196A0A1B0GTZ2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 OR7E47P-201ENST00000546390 1422 ntBASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC196A0A1B0GTZ2 AC092053.2-201ENST00000640557 1818 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms