Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV20A0A0B4J274 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 MIR572-201ENST00000384983 95 ntBASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV20A0A0B4J274 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 AL354811.1-201ENST00000610286 706 ntBASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 LINC01529-204ENST00000636474 1715 ntBASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV20A0A0B4J274 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 AC144652.1-201ENST00000609974 1624 ntBASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV20A0A0B4J274 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV20A0A0B4J274 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 AC027612.3-201ENST00000413684 1047 ntBASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 AC123595.1-201ENST00000440769 1046 ntBASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 AC138932.3-201ENST00000567634 1902 ntBASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms