Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV25-1A0A075B6N4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 AC079630.1-202ENST00000618127 1840 ntBASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRBV25-1A0A075B6N4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV25-1A0A075B6N4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV25-1A0A075B6N4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV25-1A0A075B6N4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.58■□□□□ 0.09
TRBV25-1A0A075B6N4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV25-1A0A075B6N4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 AC139530.1-201ENST00000575312 1977 ntBASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 AC007952.6-201ENST00000573168 2673 ntBASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 AC003957.1-201ENST00000625108 2673 ntBASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV25-1A0A075B6N4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 AL033527.3-201ENST00000566366 1196 ntBASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV25-1A0A075B6N4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms