Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 AC091941.1-201ENST00000623003 576 ntBASIC13.36□□□□□ -0.27
TTC30AQ86WT1 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TTC30AQ86WT1 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC100774.1-201ENST00000565581 1603 ntBASIC13.35□□□□□ -0.27
TTC30AQ86WT1 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC106872.9-201ENST00000512437 1393 ntBASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC131274.3-201ENST00000578745 1271 ntBASIC13.35□□□□□ -0.27
TTC30AQ86WT1 EMP3-204ENST00000596315 761 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC30AQ86WT1 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 FAM90A11P-201ENST00000518378 2218 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 PGC-204ENST00000425343 1152 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC007312.1-201ENST00000427493 258 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 RN7SL47P-201ENST00000488710 299 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC023162.1-201ENST00000505608 474 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC239600.1-201ENST00000603201 462 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 AC243964.3-201ENST00000623022 2028 ntBASIC13.34□□□□□ -0.27
TTC30AQ86WT1 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC30AQ86WT1 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms