Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 STK26-203ENST00000394335 3017 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AL390838.1-201ENST00000423515 2007 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 KLRK1-201ENST00000240618 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 ASB9-201ENST00000380483 1612 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RNF144A-AS1-201ENST00000418970 2374 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC011487.2-202ENST00000599707 1356 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AL512310.7-201ENST00000547785 2268 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 HLA-DQB1-203ENST00000399082 1219 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AL356273.1-201ENST00000441261 1152 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 UGT1A12P-201ENST00000447084 853 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC106748.1-201ENST00000454801 384 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RN7SL578P-201ENST00000477781 283 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RN7SL47P-201ENST00000488710 299 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 MIR3177-201ENST00000578255 82 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RN7SL596P-201ENST00000582123 288 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC005357.2-202ENST00000590507 1060 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 GBP1P1-201ENST00000394662 1740 ntBASIC13.36□□□□□ -0.27
LMO3Q8TAP4 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO3Q8TAP4 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 AL845472.1-202ENST00000624675 4080 ntBASIC13.35□□□□□ -0.27
LMO3Q8TAP4 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 TYR-201ENST00000263321 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 NOL10-201ENST00000345985 3333 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 STRADA-203ENST00000375840 2209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LMO3Q8TAP4 AC006022.1-201ENST00000425261 388 ntBASIC13.35□□□□□ -0.27
LMO3Q8TAP4 PPIEL-201ENST00000427240 813 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms