Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 AP003559.1-201ENST00000540906 1831 ntTSL 3 BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC13.39□□□□□ -0.27
LMO3Q8TAP4 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 CLIP4-203ENST00000401617 2162 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AL118508.3-201ENST00000623468 1854 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 SMCR5-201ENST00000543475 2844 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 YBX1P7-201ENST00000436766 535 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 RPL3P9-201ENST00000463217 1183 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AL645949.2-201ENST00000513434 786 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AC092612.1-201ENST00000514501 998 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 SAA2-204ENST00000528349 948 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 RN7SL121P-201ENST00000584223 273 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 C2-211ENST00000469372 1906 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 AC092902.5-201ENST00000641650 3256 ntBASIC13.38□□□□□ -0.27
LMO3Q8TAP4 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 PRAMEF18-202ENST00000624297 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO3Q8TAP4 BTN3A1-208ENST00000476549 1758 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC097372.1-201ENST00000636502 2127 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 RN7SKP20-201ENST00000362752 313 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 OR7E122P-201ENST00000383606 1017 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 MIR497-201ENST00000385056 112 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 CDK4P1-201ENST00000454213 828 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 GPX3-202ENST00000517973 612 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AP000812.3-201ENST00000544535 609 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 HNRNPA1P50-201ENST00000546565 928 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC133548.2-202ENST00000562267 148 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC106782.5-201ENST00000616011 337 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 AC021683.4-201ENST00000623348 1099 ntBASIC13.37□□□□□ -0.27
LMO3Q8TAP4 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms