Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 AC114812.4-201ENST00000506676 757 ntBASIC12.07□□□□□ -0.48
SCN2BO60939 SALL4P1-201ENST00000510352 1860 ntBASIC12.07□□□□□ -0.48
SCN2BO60939 CCDC175-202ENST00000537690 2616 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.07□□□□□ -0.48
SCN2BO60939 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.07□□□□□ -0.48
SCN2BO60939 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 AL590434.1-201ENST00000641402 1886 ntBASIC12.07□□□□□ -0.48
SCN2BO60939 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 FAM90A6P-201ENST00000515148 1394 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 AL672207.1-201ENST00000328462 1570 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 AC024475.2-201ENST00000312173 879 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SCN2BO60939 MIR33B-201ENST00000385104 96 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 HMGB3P4-201ENST00000428776 514 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 AC012362.1-201ENST00000434906 739 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 RN7SL8P-201ENST00000461771 266 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 PIEZO1P1-201ENST00000485427 219 ntBASIC12.06□□□□□ -0.48
SCN2BO60939 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.06□□□□□ -0.48
SCN2BO60939 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.06□□□□□ -0.48
SCN2BO60939 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC12.06□□□□□ -0.48
SCN2BO60939 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCN2BO60939 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.06□□□□□ -0.48
SCN2BO60939 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 FKBP4P8-201ENST00000610931 1369 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 OR10G3-202ENST00000641040 2533 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SCN2BO60939 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 AC005696.4-201ENST00000614400 3147 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 AL138762.1-201ENST00000608554 1637 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 AOC3-206ENST00000613571 3900 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SCN2BO60939 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SCN2BO60939 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms