Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX49Q9Y6V7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 AF213884.3-201ENST00000563833 479 ntBASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 AC099791.2-201ENST00000605725 427 ntBASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX49Q9Y6V7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.76
DDX49Q9Y6V7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 AL022069.1-201ENST00000568025 1636 ntBASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.01■■□□□ 1.75
DDX49Q9Y6V7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
DDX49Q9Y6V7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
DDX49Q9Y6V7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 SERBP1P1-201ENST00000396021 1160 ntBASIC26■■□□□ 1.75
DDX49Q9Y6V7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26■■□□□ 1.75
DDX49Q9Y6V7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26■■□□□ 1.75
DDX49Q9Y6V7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26■■□□□ 1.75
DDX49Q9Y6V7 AL136967.2-201ENST00000623968 743 ntBASIC26■■□□□ 1.75
DDX49Q9Y6V7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX49Q9Y6V7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX49Q9Y6V7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 MIR4767-201ENST00000582827 78 ntBASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 AL355001.2-201ENST00000620617 1191 ntBASIC25.98■■□□□ 1.75
DDX49Q9Y6V7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 EDA-201ENST00000338901 1233 ntBASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 AP001330.3-201ENST00000520123 633 ntBASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX49Q9Y6V7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 SYT6-210ENST00000641643 1587 ntBASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 AC006455.2-201ENST00000429931 906 ntBASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 AC105265.2-201ENST00000467189 838 ntBASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 RARRES2P6-201ENST00000567333 442 ntBASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms