Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.1■□□□□ 0.81
HRH3Q9Y5N1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HRH3Q9Y5N1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 AC068473.5-201ENST00000616428 2072 ntBASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 AC126544.1-201ENST00000580842 1059 ntBASIC20.08■□□□□ 0.81
HRH3Q9Y5N1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.08■□□□□ 0.8
HRH3Q9Y5N1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HRH3Q9Y5N1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.06■□□□□ 0.8
HRH3Q9Y5N1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.05■□□□□ 0.8
HRH3Q9Y5N1 TSPY26P-201ENST00000476365 1326 ntBASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 AL024507.2-201ENST00000606070 2574 ntBASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
HRH3Q9Y5N1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms