Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 AC012676.1-201ENST00000574705 1949 ntBASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA6Q9UN73 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 ESRRAP2-201ENST00000418437 1549 ntBASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA6Q9UN73 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 AC068587.7-201ENST00000641602 218 ntBASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA6Q9UN73 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA6Q9UN73 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 MIR572-201ENST00000384983 95 ntBASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA6Q9UN73 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 AC233723.2-201ENST00000623798 2106 ntBASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA6Q9UN73 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25■■□□□ 1.59
PCDHA6Q9UN73 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA6Q9UN73 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
PCDHA6Q9UN73 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA6Q9UN73 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 AC127496.7-201ENST00000625110 1798 ntBASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA6Q9UN73 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 AC010141.3-201ENST00000456659 717 ntBASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 AC137767.1-201ENST00000602918 1920 ntBASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PCDHA6Q9UN73 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms