Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
RIMBP3Q9UFD9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC35.55■■■■□ 3.28
RIMBP3Q9UFD9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 BX276092.2-201ENST00000417668 665 ntBASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 ERN1-208ENST00000606895 2068 ntBASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
RIMBP3Q9UFD9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
RIMBP3Q9UFD9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC35.53■■■■□ 3.28
RIMBP3Q9UFD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC35.53■■■■□ 3.28
RIMBP3Q9UFD9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 AC097658.1-201ENST00000475555 843 ntBASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 AC091874.3-201ENST00000512672 1195 ntBASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RIMBP3Q9UFD9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 AC016405.3-201ENST00000607710 860 ntBASIC35.51■■■■□ 3.28
RIMBP3Q9UFD9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC35.51■■■■□ 3.27
RIMBP3Q9UFD9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.51■■■■□ 3.27
RIMBP3Q9UFD9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 OR10C1-204ENST00000622521 1039 ntBASIC35.5■■■■□ 3.27
RIMBP3Q9UFD9 ALDH1A3-203ENST00000557963 1670 ntBASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 AP001160.3-201ENST00000601484 763 ntBASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
RIMBP3Q9UFD9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 KRT18P35-201ENST00000510488 1269 ntBASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
RIMBP3Q9UFD9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC35.47■■■■□ 3.27
RIMBP3Q9UFD9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
RIMBP3Q9UFD9 AC005224.4-201ENST00000583262 1652 ntBASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC35.45■■■■□ 3.27
RIMBP3Q9UFD9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 AC007322.4-201ENST00000509611 723 ntBASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 Z99916.2-201ENST00000604037 246 ntBASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 FP325331.1-202ENST00000623531 1380 ntBASIC35.44■■■■□ 3.26
RIMBP3Q9UFD9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC35.43■■■■□ 3.26
RIMBP3Q9UFD9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC35.43■■■■□ 3.26
RIMBP3Q9UFD9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC35.43■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms