Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 AC022616.5-201ENST00000518796 181 ntBASIC21.07■□□□□ 0.96
NDE1Q9NXR1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDE1Q9NXR1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 AC244015.2-201ENST00000616358 1861 ntBASIC21.06■□□□□ 0.96
NDE1Q9NXR1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
NDE1Q9NXR1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 AL592293.1-201ENST00000502889 1188 ntBASIC21.05■□□□□ 0.96
NDE1Q9NXR1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
NDE1Q9NXR1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.04■□□□□ 0.96
NDE1Q9NXR1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDE1Q9NXR1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 AC004448.1-201ENST00000458332 883 ntBASIC21.02■□□□□ 0.96
NDE1Q9NXR1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.02■□□□□ 0.96
NDE1Q9NXR1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDE1Q9NXR1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDE1Q9NXR1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDE1Q9NXR1 LINC01521-201ENST00000504184 1943 ntBASIC21■□□□□ 0.95
NDE1Q9NXR1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDE1Q9NXR1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms