Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC006455.2-201ENST00000429931 906 ntBASIC24.56■■□□□ 1.52
RNF216Q9NWF9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.55■■□□□ 1.52
RNF216Q9NWF9 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 ACTG1P22-201ENST00000603793 1099 ntBASIC24.55■■□□□ 1.52
RNF216Q9NWF9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.55■■□□□ 1.52
RNF216Q9NWF9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 AL355816.2-201ENST00000610049 647 ntBASIC24.54■■□□□ 1.52
RNF216Q9NWF9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF216Q9NWF9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 HLA-L-211ENST00000482052 1765 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 AC092953.2-201ENST00000608000 699 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 pRNA.6-201ENST00000610482 90 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 pRNA.5-201ENST00000612139 90 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 pRNA.11-201ENST00000618423 90 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 pRNA.13-201ENST00000619112 90 ntBASIC24.53■■□□□ 1.52
RNF216Q9NWF9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.53■■□□□ 1.52
RNF216Q9NWF9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 AC126544.1-201ENST00000580842 1059 ntBASIC24.52■■□□□ 1.52
RNF216Q9NWF9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF216Q9NWF9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC24.51■■□□□ 1.51
RNF216Q9NWF9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC24.51■■□□□ 1.51
RNF216Q9NWF9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC24.51■■□□□ 1.51
RNF216Q9NWF9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.51■■□□□ 1.51
RNF216Q9NWF9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 AC079791.1-201ENST00000605356 973 ntBASIC24.5■■□□□ 1.51
RNF216Q9NWF9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF216Q9NWF9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms