Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 AC091305.1-201ENST00000479476 895 ntBASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 AC126544.1-201ENST00000580842 1059 ntBASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ECHDC1Q9NTX5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 AC010141.3-201ENST00000456659 717 ntBASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 AC080038.3-201ENST00000623346 1952 ntBASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.67■■□□□ 1.86
ECHDC1Q9NTX5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ECHDC1Q9NTX5 GUSBP5-202ENST00000510805 1989 ntBASIC26.66■■□□□ 1.86
ECHDC1Q9NTX5 AC142381.2-201ENST00000566120 298 ntBASIC26.66■■□□□ 1.86
ECHDC1Q9NTX5 AC087239.1-201ENST00000622671 572 ntBASIC26.66■■□□□ 1.86
ECHDC1Q9NTX5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ECHDC1Q9NTX5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ECHDC1Q9NTX5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ECHDC1Q9NTX5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ECHDC1Q9NTX5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 IGHV3-19-201ENST00000521488 291 ntBASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ECHDC1Q9NTX5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
ECHDC1Q9NTX5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 OXCT2P1-201ENST00000447263 1535 ntBASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 AC139530.1-201ENST00000575312 1977 ntBASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 AC079089.2-201ENST00000531211 1277 ntBASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
ECHDC1Q9NTX5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 AL117328.2-201ENST00000624617 1940 ntBASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.6■■□□□ 1.85
ECHDC1Q9NTX5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ECHDC1Q9NTX5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ECHDC1Q9NTX5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
ECHDC1Q9NTX5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms