Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NECTIN3Q9NQS3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 AC133637.1-201ENST00000624115 1537 ntBASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 AL031432.3-201ENST00000607698 485 ntBASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 AC005837.3-201ENST00000612163 286 ntBASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NECTIN3Q9NQS3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NECTIN3Q9NQS3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
NECTIN3Q9NQS3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NECTIN3Q9NQS3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.83■□□□□ 0.92
NECTIN3Q9NQS3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NECTIN3Q9NQS3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NECTIN3Q9NQS3 GUSBP5-202ENST00000510805 1989 ntBASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 EDA-201ENST00000338901 1233 ntBASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN3Q9NQS3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 AC007375.3-201ENST00000600936 2314 ntBASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 AL355001.2-201ENST00000620617 1191 ntBASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NECTIN3Q9NQS3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 SUDS3P1-201ENST00000505831 966 ntBASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN3Q9NQS3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms