Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.82■□□□□ 0.6
C12orf4Q9NQ89 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
C12orf4Q9NQ89 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf4Q9NQ89 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 AC007952.6-201ENST00000573168 2673 ntBASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 AC003957.1-201ENST00000625108 2673 ntBASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf4Q9NQ89 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 AC242852.2-201ENST00000615738 1807 ntBASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf4Q9NQ89 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 ATP5G2P3-201ENST00000429083 425 ntBASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C12orf4Q9NQ89 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 AL353803.4-201ENST00000565882 1934 ntBASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf4Q9NQ89 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 AC004987.1-201ENST00000428627 508 ntBASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf4Q9NQ89 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
C12orf4Q9NQ89 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C12orf4Q9NQ89 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms