Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZFYVE28Q9HCC9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 AF201337.1-201ENST00000520239 748 ntBASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.24■■□□□ 1.63
ZFYVE28Q9HCC9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZFYVE28Q9HCC9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ZFYVE28Q9HCC9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
ZFYVE28Q9HCC9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZFYVE28Q9HCC9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.23■■□□□ 1.63
ZFYVE28Q9HCC9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 MYCNOS-205ENST00000641950 531 ntBASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 AC005224.4-201ENST00000583262 1652 ntBASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.22■■□□□ 1.63
ZFYVE28Q9HCC9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZFYVE28Q9HCC9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.2■■□□□ 1.63
ZFYVE28Q9HCC9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ZFYVE28Q9HCC9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE28Q9HCC9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE28Q9HCC9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.2■■□□□ 1.62
ZFYVE28Q9HCC9 AC105036.2-201ENST00000569468 176 ntBASIC25.2■■□□□ 1.62
ZFYVE28Q9HCC9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE28Q9HCC9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 POU5F1P3-201ENST00000428824 1078 ntBASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 AC009237.3-201ENST00000393279 1427 ntBASIC25.19■■□□□ 1.62
ZFYVE28Q9HCC9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 AC133552.2-202ENST00000575694 574 ntBASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 ITM2C-210ENST00000620962 501 ntBASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE28Q9HCC9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 AC022211.4-201ENST00000625094 2161 ntBASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 AP001160.3-201ENST00000601484 763 ntBASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.17■■□□□ 1.62
ZFYVE28Q9HCC9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 KRT18P29-201ENST00000397031 1267 ntBASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE28Q9HCC9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms