Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 YBX1P1-201ENST00000445822 960 ntBASIC24.29■■□□□ 1.48
ATP6V0A4Q9HBG4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V0A4Q9HBG4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP6V0A4Q9HBG4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP6V0A4Q9HBG4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V0A4Q9HBG4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
ATP6V0A4Q9HBG4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 AC010141.3-201ENST00000456659 717 ntBASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 AL358852.1-201ENST00000623174 1268 ntBASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 LINC01960-201ENST00000563759 1884 ntBASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.27■■□□□ 1.48
ATP6V0A4Q9HBG4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6V0A4Q9HBG4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6V0A4Q9HBG4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V0A4Q9HBG4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 CLDN5-201ENST00000403084 2357 ntBASIC24.23■■□□□ 1.47
ATP6V0A4Q9HBG4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 AC027612.3-201ENST00000413684 1047 ntBASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 AC012414.1-201ENST00000556676 535 ntBASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V0A4Q9HBG4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 AL354811.1-201ENST00000610286 706 ntBASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 AC079834.2-201ENST00000609776 1949 ntBASIC24.21■■□□□ 1.47
ATP6V0A4Q9HBG4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms