Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OR2I1P-207ENST00000453522 948 ntBASIC20.91■□□□□ 0.94
BRF2Q9HAW0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 DUX4L19-201ENST00000557448 1267 ntBASIC20.91■□□□□ 0.94
BRF2Q9HAW0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.91■□□□□ 0.94
BRF2Q9HAW0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 AC068587.7-201ENST00000641602 218 ntBASIC20.91■□□□□ 0.94
BRF2Q9HAW0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 AL138724.1-201ENST00000606771 1088 ntBASIC20.9■□□□□ 0.94
BRF2Q9HAW0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BRF2Q9HAW0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
BRF2Q9HAW0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
BRF2Q9HAW0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRF2Q9HAW0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 MIR4466-201ENST00000606121 54 ntBASIC20.89■□□□□ 0.93
BRF2Q9HAW0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRF2Q9HAW0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BRF2Q9HAW0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 AC131281.2-201ENST00000520478 145 ntBASIC20.87■□□□□ 0.93
BRF2Q9HAW0 SYT6-210ENST00000641643 1587 ntBASIC20.87■□□□□ 0.93
BRF2Q9HAW0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRF2Q9HAW0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.86■□□□□ 0.93
BRF2Q9HAW0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRF2Q9HAW0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRF2Q9HAW0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms