Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CUEDC2Q9H467 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CUEDC2Q9H467 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.41■■□□□ 1.5
CUEDC2Q9H467 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 AC136469.2-201ENST00000623944 1028 ntBASIC24.4■■□□□ 1.5
CUEDC2Q9H467 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CUEDC2Q9H467 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CUEDC2Q9H467 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.39■■□□□ 1.49
CUEDC2Q9H467 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CUEDC2Q9H467 LINC00565-201ENST00000562710 2331 ntBASIC24.38■■□□□ 1.49
CUEDC2Q9H467 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.37■■□□□ 1.49
CUEDC2Q9H467 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 AL136116.3-201ENST00000402907 1138 ntBASIC24.36■■□□□ 1.49
CUEDC2Q9H467 AC079089.2-201ENST00000531211 1277 ntBASIC24.36■■□□□ 1.49
CUEDC2Q9H467 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUEDC2Q9H467 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 AC087239.1-201ENST00000622671 572 ntBASIC24.35■■□□□ 1.49
CUEDC2Q9H467 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUEDC2Q9H467 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CUEDC2Q9H467 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 AC131212.1-201ENST00000613771 668 ntBASIC24.33■■□□□ 1.49
CUEDC2Q9H467 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CUEDC2Q9H467 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms