Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 EP400NL-214ENST00000641289 2402 ntBASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC68Q9H2F9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 LINC00526-201ENST00000581067 1875 ntBASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 AC006455.2-201ENST00000429931 906 ntBASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC68Q9H2F9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC68Q9H2F9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 AC133637.1-201ENST00000624115 1537 ntBASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 AL512631.2-201ENST00000604634 923 ntBASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC68Q9H2F9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CCDC68Q9H2F9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC68Q9H2F9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC68Q9H2F9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms