Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
VPS11Q9H270 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS11Q9H270 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS11Q9H270 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS11Q9H270 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VPS11Q9H270 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VPS11Q9H270 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS11Q9H270 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
VPS11Q9H270 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS11Q9H270 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS11Q9H270 FAM99A-202ENST00000538190 1989 ntBASIC21.9■■□□□ 1.1
VPS11Q9H270 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS11Q9H270 AC010542.4-201ENST00000563151 1910 ntBASIC21.9■■□□□ 1.1
VPS11Q9H270 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS11Q9H270 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
VPS11Q9H270 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS11Q9H270 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
VPS11Q9H270 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS11Q9H270 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS11Q9H270 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS11Q9H270 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
VPS11Q9H270 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS11Q9H270 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
VPS11Q9H270 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS11Q9H270 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
VPS11Q9H270 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS11Q9H270 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.88■■□□□ 1.09
VPS11Q9H270 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS11Q9H270 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
VPS11Q9H270 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS11Q9H270 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
VPS11Q9H270 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS11Q9H270 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.87■■□□□ 1.09
VPS11Q9H270 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.87■■□□□ 1.09
VPS11Q9H270 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
VPS11Q9H270 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
VPS11Q9H270 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
VPS11Q9H270 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.87■■□□□ 1.09
VPS11Q9H270 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.87■■□□□ 1.09
VPS11Q9H270 LINC01960-201ENST00000563759 1884 ntBASIC21.87■■□□□ 1.09
VPS11Q9H270 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.87■■□□□ 1.09
VPS11Q9H270 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS11Q9H270 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VPS11Q9H270 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VPS11Q9H270 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS11Q9H270 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.86■■□□□ 1.09
VPS11Q9H270 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.86■■□□□ 1.09
VPS11Q9H270 AC009086.3-201ENST00000623486 1008 ntBASIC21.86■■□□□ 1.09
VPS11Q9H270 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS11Q9H270 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
VPS11Q9H270 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS11Q9H270 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS11Q9H270 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VPS11Q9H270 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
VPS11Q9H270 DUX4L4-201ENST00000566884 1269 ntBASIC21.85■■□□□ 1.09
VPS11Q9H270 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VPS11Q9H270 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS11Q9H270 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS11Q9H270 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.84■■□□□ 1.09
VPS11Q9H270 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.84■■□□□ 1.09
VPS11Q9H270 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS11Q9H270 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS11Q9H270 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS11Q9H270 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS11Q9H270 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS11Q9H270 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS11Q9H270 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VPS11Q9H270 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS11Q9H270 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS11Q9H270 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS11Q9H270 AC092028.1-203ENST00000608262 953 ntBASIC21.83■■□□□ 1.09
VPS11Q9H270 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.83■■□□□ 1.09
VPS11Q9H270 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS11Q9H270 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
VPS11Q9H270 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.83■■□□□ 1.08
VPS11Q9H270 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.83■■□□□ 1.08
VPS11Q9H270 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.83■■□□□ 1.08
VPS11Q9H270 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS11Q9H270 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS11Q9H270 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms