Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLPBQ9H078 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLPBQ9H078 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CLPBQ9H078 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.89■■□□□ 1.09
CLPBQ9H078 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLPBQ9H078 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.88■■□□□ 1.09
CLPBQ9H078 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CLPBQ9H078 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.88■■□□□ 1.09
CLPBQ9H078 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.88■■□□□ 1.09
CLPBQ9H078 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.88■■□□□ 1.09
CLPBQ9H078 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.88■■□□□ 1.09
CLPBQ9H078 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
CLPBQ9H078 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLPBQ9H078 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.87■■□□□ 1.09
CLPBQ9H078 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 TSPY26P-201ENST00000476365 1326 ntBASIC21.87■■□□□ 1.09
CLPBQ9H078 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.87■■□□□ 1.09
CLPBQ9H078 AC104564.3-201ENST00000582367 638 ntBASIC21.87■■□□□ 1.09
CLPBQ9H078 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CLPBQ9H078 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.87■■□□□ 1.09
CLPBQ9H078 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CLPBQ9H078 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CLPBQ9H078 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CLPBQ9H078 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLPBQ9H078 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.86■■□□□ 1.09
CLPBQ9H078 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPBQ9H078 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPBQ9H078 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
CLPBQ9H078 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.86■■□□□ 1.09
CLPBQ9H078 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLPBQ9H078 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLPBQ9H078 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.86■■□□□ 1.09
CLPBQ9H078 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPBQ9H078 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CLPBQ9H078 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.86■■□□□ 1.09
CLPBQ9H078 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLPBQ9H078 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CLPBQ9H078 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 AC010525.1-201ENST00000585559 441 ntBASIC21.85■■□□□ 1.09
CLPBQ9H078 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.85■■□□□ 1.09
CLPBQ9H078 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CLPBQ9H078 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.85■■□□□ 1.09
CLPBQ9H078 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLPBQ9H078 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPBQ9H078 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLPBQ9H078 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLPBQ9H078 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CLPBQ9H078 AL162430.1-201ENST00000480705 870 ntBASIC21.84■■□□□ 1.09
CLPBQ9H078 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.84■■□□□ 1.09
CLPBQ9H078 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLPBQ9H078 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CLPBQ9H078 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CLPBQ9H078 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CLPBQ9H078 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.83■■□□□ 1.09
CLPBQ9H078 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.83■■□□□ 1.09
CLPBQ9H078 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLPBQ9H078 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CLPBQ9H078 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.83■■□□□ 1.09
CLPBQ9H078 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLPBQ9H078 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.83■■□□□ 1.09
CLPBQ9H078 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
CLPBQ9H078 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 ESRRAP2-201ENST00000418437 1549 ntBASIC21.83■■□□□ 1.09
CLPBQ9H078 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLPBQ9H078 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLPBQ9H078 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.83■■□□□ 1.08
CLPBQ9H078 AC233723.2-201ENST00000623798 2106 ntBASIC21.83■■□□□ 1.08
CLPBQ9H078 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLPBQ9H078 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
CLPBQ9H078 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLPBQ9H078 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms